; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g262500 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g262500
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCsor_Chr11:11957309..11959406
RNA-Seq ExpressionCsor.00g262500
SyntenyCsor.00g262500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588842.1 hypothetical protein SDJN03_17407, partial [Cucurbita argyrosperma subsp. sororia]8.04e-8050.59Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QDT P+  ATFLF  +INE A   F    F+I+ASNPSLRFI+ FYI K  C DF I Q+HI  +SLP F  AIM A   RFDTM+I+  +P +
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        M LTFE STP G VP  + +  L LS ++A+D   P+ ++  T+K + F H+L ELP    DLVC+TP++ +VKFS  S E+ LT E GQC  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        DT+F +VL PR FF +LSF+T  ++WF RT N GS+M V +S  +A Y+IHFP
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

KAG6588844.1 hypothetical protein SDJN03_17409, partial [Cucurbita argyrosperma subsp. sororia]8.33e-188100Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRMTP
        DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRMTP
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRMTP

XP_022928485.1 uncharacterized protein LOC111435280 isoform X1 [Cucurbita moschata]3.99e-7548.63Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QD +P+  A FLF+ +IN  A  EF     TI+A+NP+LRFI+T YI K  C DF I Q+HI  +SL  F  AIM A    FDT+AI+  +   
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFE STPSG V    H   L +S S  +D P P+  +  T+KA+ F  +L ELP L  DLV +TP+  +VKFS    EI L++E G+C  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM
        DT F VVL PRMFFL+LS +T+ ++WF+RT + GS+M VPT   YA Y+IHFP++
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM

XP_022989521.1 uncharacterized protein LOC111486581 [Cucurbita maxima]1.44e-7549.59Show/hide
Query:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFN-IPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS
        M ATFLF ++I  VA  + T  GF+++ASNP LR+ +T YI  + C+D++ I + H  SLSLP  R AI       FDTMAI+ +  DQ+ LTFE  TPS
Subjt:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFN-IPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS

Query:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR
        GP P L HQ +   S SE  D  +P+ T++  VK ++F H+L+ELP   DD+VC+TP +  V+FS+ S +I LTEE  QC+ +GY++  DT+F +VLQPR
Subjt:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR

Query:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        MFF NLSF T+A+VWF RT N GS M+ P    Y  YFI FP
Subjt:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

XP_022989711.1 uncharacterized protein LOC111486711 [Cucurbita maxima]4.60e-7950.99Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QD +P+  A FLF+ +IN  A  EF     TI+A+NP+LRFI+T YI K+ C DF I Q+HI  +SL  F  AIM A   RFDT+AI+  +   
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFE STPSG VP   H   L +S S  VD P P+  +  T+KA+ F  VLAELP L  DLV +TP+  +VKFS    EI L++E G+C  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        DT+F VVL PRMFFL LS +T+ ++WF+RT + GS+M VPT   YA Y+IHFP
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

TrEMBL top hitse value%identityAlignment
A0A6J1EKE7 uncharacterized protein LOC111435280 isoform X22.46e-7046.67Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QD +P+  A FLF+ +IN  A  EF     TI+A+NP+LRFI+T YI K  C DF I Q+HI  +SL  F  AIM A    FDT+AI+  +   
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFE S          H   L +S S  +D P P+  +  T+KA+ F  +L ELP L  DLV +TP+  +VKFS    EI L++E G+C  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM
        DT F VVL PRMFFL+LS +T+ ++WF+RT + GS+M VPT   YA Y+IHFP++
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM

A0A6J1EP49 uncharacterized protein LOC1114352712.12e-7248.76Show/hide
Query:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNI-PQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS
        M ATFLF ++I  VA  + T  GF+++ASNP LR+ +T YI  + C+D+++  + H  S+SLP  R AI     A FDTMAI+ +  DQ+ LTFE  TPS
Subjt:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNI-PQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS

Query:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR
        G  P L     L  S SE  D  +P+ T++  VK ++F H+L+ELP   DD+VC+TP +  V FS+ S EI LTEE  QC+ +GY++  DT+F +VLQPR
Subjt:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR

Query:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        MFF NLSF T+A+VWF RT N GS M+ P    Y  YFI FP
Subjt:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

A0A6J1ERT1 uncharacterized protein LOC111435280 isoform X11.93e-7548.63Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QD +P+  A FLF+ +IN  A  EF     TI+A+NP+LRFI+T YI K  C DF I Q+HI  +SL  F  AIM A    FDT+AI+  +   
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFE STPSG V    H   L +S S  +D P P+  +  T+KA+ F  +L ELP L  DLV +TP+  +VKFS    EI L++E G+C  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM
        DT F VVL PRMFFL+LS +T+ ++WF+RT + GS+M VPT   YA Y+IHFP++
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRM

A0A6J1JKA8 uncharacterized protein LOC1114865816.97e-7649.59Show/hide
Query:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFN-IPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS
        M ATFLF ++I  VA  + T  GF+++ASNP LR+ +T YI  + C+D++ I + H  SLSLP  R AI       FDTMAI+ +  DQ+ LTFE  TPS
Subjt:  MAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFN-IPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTFENSTPS

Query:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR
        GP P L HQ +   S SE  D  +P+ T++  VK ++F H+L+ELP   DD+VC+TP +  V+FS+ S +I LTEE  QC+ +GY++  DT+F +VLQPR
Subjt:  GPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQPR

Query:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        MFF NLSF T+A+VWF RT N GS M+ P    Y  YFI FP
Subjt:  MFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

A0A6J1JKX5 uncharacterized protein LOC1114867112.23e-7950.99Show/hide
Query:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ
        M  IR+QD +P+  A FLF+ +IN  A  EF     TI+A+NP+LRFI+T YI K+ C DF I Q+HI  +SL  F  AIM A   RFDT+AI+  +   
Subjt:  MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQ

Query:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY
        MILTFE STPSG VP   H   L +S S  VD P P+  +  T+KA+ F  VLAELP L  DLV +TP+  +VKFS    EI L++E G+C  +GY+   
Subjt:  MILTFENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVY

Query:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP
        DT+F VVL PRMFFL LS +T+ ++WF+RT + GS+M VPT   YA Y+IHFP
Subjt:  DTEFYVVLQPRMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCATCAGAATTCAAGACACCGATCCCCTCATGGCCGCAACCTTCCTATTCTCAAACTACATTAACGAAGTAGCCGTCTTTGAGTTCACATCCGAAGGC
TTCACCATAGTTGCCTCAAACCCTTCCCTTCGTTTCATTTCAACATTTTACATTGACAAAAACTCTTGCGTCGACTTTAACATCCCTCAATCACACATTGTAAGC
CTTTCCCTTCCACTCTTTCGTGGTGCTATCATGGCTGCCACCCCCGCACGTTTTGATACAATGGCTATCAGTTTTCAAGCCCCTGATCAAATGATCCTTACATTC
GAGAATTCAACACCTTCAGGCCCTGTGCCTAACTTGGATCATCAATATGTGCTCGACCTGTCAGCTTCGGAAGCGGTGGATTTACCTCTACCTGTAAATACACAA
TTTGTCACTGTTAAAGCCCAGTATTTTGGACACGTCCTAGCAGAATTACCTTTCTTGCCTGATGATTTAGTTTGTATTACTCCATCATCTTGGGATGTCAAATTC
TCACTTGCATCCACGGAGATTACTCTTACCGAAGAGGATGGACAATGTTTAAATCTGGGTTACGATGATGTTTATGATACTGAATTCTACGTTGTTCTTCAGCCG
AGGATGTTTTTCCTTAATTTGTCATTTAGAACGACAGCAAATGTATGGTTTTTTAGGACAGACAATATGGGTAGCCTAATGGTTGTCCCAACTAGTGAACCGTAT
GCTGGATATTTCATCCATTTTCCTCGAATGACACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTCATCAGAATTCAAGACACCGATCCCCTCATGGCCGCAACCTTCCTATTCTCAAACTACATTAACGAAGTAGCCGTCTTTGAGTTCACATCCGAAGGC
TTCACCATAGTTGCCTCAAACCCTTCCCTTCGTTTCATTTCAACATTTTACATTGACAAAAACTCTTGCGTCGACTTTAACATCCCTCAATCACACATTGTAAGC
CTTTCCCTTCCACTCTTTCGTGGTGCTATCATGGCTGCCACCCCCGCACGTTTTGATACAATGGCTATCAGTTTTCAAGCCCCTGATCAAATGATCCTTACATTC
GAGAATTCAACACCTTCAGGCCCTGTGCCTAACTTGGATCATCAATATGTGCTCGACCTGTCAGCTTCGGAAGCGGTGGATTTACCTCTACCTGTAAATACACAA
TTTGTCACTGTTAAAGCCCAGTATTTTGGACACGTCCTAGCAGAATTACCTTTCTTGCCTGATGATTTAGTTTGTATTACTCCATCATCTTGGGATGTCAAATTC
TCACTTGCATCCACGGAGATTACTCTTACCGAAGAGGATGGACAATGTTTAAATCTGGGTTACGATGATGTTTATGATACTGAATTCTACGTTGTTCTTCAGCCG
AGGATGTTTTTCCTTAATTTGTCATTTAGAACGACAGCAAATGTATGGTTTTTTAGGACAGACAATATGGGTAGCCTAATGGTTGTCCCAACTAGTGAACCGTAT
GCTGGATATTTCATCCATTTTCCTCGAATGACACCTTGA
Protein sequenceShow/hide protein sequence
MSFIRIQDTDPLMAATFLFSNYINEVAVFEFTSEGFTIVASNPSLRFISTFYIDKNSCVDFNIPQSHIVSLSLPLFRGAIMAATPARFDTMAISFQAPDQMILTF
ENSTPSGPVPNLDHQYVLDLSASEAVDLPLPVNTQFVTVKAQYFGHVLAELPFLPDDLVCITPSSWDVKFSLASTEITLTEEDGQCLNLGYDDVYDTEFYVVLQP
RMFFLNLSFRTTANVWFFRTDNMGSLMVVPTSEPYAGYFIHFPRMTP