; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g268100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g268100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description50S ribosomal protein-like protein
Genome locationCsor_Chr15:293107..293589
RNA-Seq ExpressionCsor.00g268100
SyntenyCsor.00g268100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]3.47e-10599.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANT AAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]1.42e-10498.75Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANT AAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]1.02e-9089.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDVDDDDDD+ NMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT  N  AAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_023551541.1 uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo]4.23e-106100Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]4.50e-9289.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SP ASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSAD QDVDDDDDD D MIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEE+E  LT ANT AAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064615.35e-8887.5Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQC VAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDVDD++DD+ NMIPEKN+KEVRARRKLKDLFVSSPP +
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT +NT AAGIGT S TRRSLRPIS+TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1FG66 uncharacterized protein LOC1114451191.68e-10599.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANT AAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1H7N8 uncharacterized protein LOC1114609052.02e-9088.75Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDVDDDDDD+ NMIPEKNDKEV+ARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT  N  AAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1JSX9 uncharacterized protein LOC1114875511.42e-9089.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDVDDDDDD+ NMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        D VSDRRIEEQE LLT  NT AAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1JYC4 uncharacterized protein LOC1114894146.85e-10598.75Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANT AAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown4.8e-2143.43Show/hide
Query:  TLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPL
        +L KFKLLA+ C+      +SPT SPV HL  RRRKTLR+LL R +DR R P   N+ D                +K DK  ++R+ RKL DLFVSSPP 
Subjt:  TLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPL

Query:  E--------DKVSDRRIEEQEALLTTANTGAAGIGTPSITRR-----SLRPISA-TFRYRFLRRAWRPVLVTIPE
        E        DK +   +E +  +     +  AG G     RR     S+RP+S+ T R R LRR+WRPVLVTIPE
Subjt:  E--------DKVSDRRIEEQEALLTTANTGAAGIGTPSITRR-----SLRPISA-TFRYRFLRRAWRPVLVTIPE

AT1G68430.1 unknown protein3.3e-0935.5Show/hide
Query:  MATLHKFKLLASQCAVAG-CPTQSPT--ASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSP
        MATL +FK L +QC VA   PT+SP+   SP+  L RR++ TL+MLL+ A   R   Q                   +   + K+V A RKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAG-CPTQSPT--ASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSP

Query:  PLEDKVSD------RRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
          E++  +      +  EE  A +      A+ +   S       P+   F  R L+RAWRP L TI E
Subjt:  PLEDKVSD------RRIEEQEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

AT5G16200.1 50S ribosomal protein-related1.0e-1539.29Show/hide
Query:  MATLHKFKLLAS----QCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AG PT SPT SPVF+L  RRRKTLRML ++ +D RR   +      Q +++  + D N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVS

Query:  --SPPLEDKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISA-TFRYRFLRRAWRPVLVTIPE
          SPP + +     I E+ + ++  N  + G G     RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKVSDRRIEEQEALLTTANTGAAGIGTPSITRRSLRPISA-TFRYRFLRRAWRPVLVTIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTTGCCCTACTCAAAGCCCCACTGCTAGCCCCGTCTTTCACCTCCGCCGTCGCCGACG
CAAAACCCTAAGAATGCTCCTCAATCGCGCCGATCGCCGCCGATTTCCCTACCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACGACAATA
TGATTCCGGAGAAAAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCACTCGAGGATAAGGTTTCCGACAGGAGAATCGAAGAA
CAGGAAGCATTGTTAACGACGGCCAACACCGGCGCCGCTGGAATCGGTACGCCCTCCATCACTCGCCGCTCTCTAAGGCCGATATCGGCGACATTTCGTTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTCACCATTCCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTTGCCCTACTCAAAGCCCCACTGCTAGCCCCGTCTTTCACCTCCGCCGTCGCCGACG
CAAAACCCTAAGAATGCTCCTCAATCGCGCCGATCGCCGCCGATTTCCCTACCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACGACAATA
TGATTCCGGAGAAAAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCACTCGAGGATAAGGTTTCCGACAGGAGAATCGAAGAA
CAGGAAGCATTGTTAACGACGGCCAACACCGGCGCCGCTGGAATCGGTACGCCCTCCATCACTCGCCGCTCTCTAAGGCCGATATCGGCGACATTTCGTTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTCACCATTCCCGAATAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEE
QEALLTTANTGAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE