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Csor.00g270080 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g270080
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTBC1 domain family member 15
Genome locationCsor_Chr12:15450544..15452422
RNA-Seq ExpressionCsor.00g270080
SyntenyCsor.00g270080
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0090630 - activation of GTPase activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005096 - GTPase activator activity (molecular function)
InterPro domainsIPR021935 - Small G protein signalling modulator 1/2, Rab-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586380.1 hypothetical protein SDJN03_19113, partial [Cucurbita argyrosperma subsp. sororia]6.19e-83100Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLSRIRIRKGYASMGGMQKLYCACAGENAAANIP
        MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLSRIRIRKGYASMGGMQKLYCACAGENAAANIP
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLSRIRIRKGYASMGGMQKLYCACAGENAAANIP

Query:  PGTPSSLPLDDGTYYVQQDEVL
        PGTPSSLPLDDGTYYVQQDEVL
Subjt:  PGTPSSLPLDDGTYYVQQDEVL

KAG7021231.1 GYP7 [Cucurbita argyrosperma subsp. argyrosperma]6.01e-39100Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

XP_022966027.1 uncharacterized protein LOC111465734 [Cucurbita maxima]4.68e-40100Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

XP_023536788.1 uncharacterized protein LOC111798065 [Cucurbita pepo subsp. pepo]4.41e-40100Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

XP_038889961.1 TBC1 domain family member 15 [Benincasa hispida]6.89e-3086.96Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSS +PEGAE+VYSKENVTI PTQFASERI GRLRLIK+ S LFITWIPY+GQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

TrEMBL top hitse value%identityAlignment
A0A0A0LL16 Rab-GAP TBC domain-containing protein5.67e-2985.51Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSS + EGAE+VYSKENVTI PTQFASERI GRLRLIK+ S LFITWIPY+GQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

A0A6J1CMU0 TBC1 domain family member 15 isoform X26.73e-2982.61Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMR+DSGRGSSS +PEGAE+VYSKENVTI PTQFASERI GRLRL K+ S LFITWIPY+GQNSNA+LS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

A0A6J1CNB3 TBC1 domain family member 15 isoform X11.06e-2882.61Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMR+DSGRGSSS +PEGAE+VYSKENVTI PTQFASERI GRLRL K+ S LFITWIPY+GQNSNA+LS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

A0A6J1HLW8 uncharacterized protein LOC1114657342.27e-40100Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

A0A6J1KJ59 TBC1 domain family member 151.46e-2884.06Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMRTDSGRGSSS +PE  E+VYSKENVTI PTQFASERI GRLRLIK+ S LFITWIPY+GQNSNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G52580.1 RabGAP/TBC domain-containing protein5.9e-1962.32Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMR+DSG+ S   + E A ++Y K+NV I PTQFASERI GRL+L K++S LF++WIPY+GQ SNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

AT5G52580.1 RabGAP/TBC domain-containing protein7.2e-0974.29Show/hide
Query:  CACAGENAAANIPPGTPSSLPLDDGTYYVQQDEVL
        C  AGEN AA+IPPGTP SLPLDDGT Y Q+D+VL
Subjt:  CACAGENAAANIPPGTPSSLPLDDGTYYVQQDEVL

AT5G52580.2 RabGAP/TBC domain-containing protein5.9e-1962.32Show/hide
Query:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS
        MMR+DSG+ S   + E A ++Y K+NV I PTQFASERI GRL+L K++S LF++WIPY+GQ SNAKLS
Subjt:  MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLS

AT5G52580.2 RabGAP/TBC domain-containing protein7.2e-0974.29Show/hide
Query:  CACAGENAAANIPPGTPSSLPLDDGTYYVQQDEVL
        C  AGEN AA+IPPGTP SLPLDDGT Y Q+D+VL
Subjt:  CACAGENAAANIPPGTPSSLPLDDGTYYVQQDEVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGCACCGATAGCGGTCGAGGAAGCTCATCGAGGCAACCGGAAGGTGCAGAGATTGTTTATTCGAAAGAAAATGTAACGATTCAGCCTACGCAGTTTGCG
TCTGAAAGGATTCGTGGAAGATTGAGGTTGATCAAGCGAGAATCGTCTCTGTTCATTACCTGGATTCCTTACGAAGGACAAAACTCAAATGCGAAATTATCGAGA
ATTCGAATACGGAAAGGTTATGCATCTATGGGAGGGATGCAGAAGCTTTATTGTGCGTGTGCAGGGGAGAATGCTGCTGCTAACATCCCTCCTGGTACCCCATCC
TCATTACCACTGGATGATGGGACATATTACGTTCAACAAGATGAAGTCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCGCACCGATAGCGGTCGAGGAAGCTCATCGAGGCAACCGGAAGGTGCAGAGATTGTTTATTCGAAAGAAAATGTAACGATTCAGCCTACGCAGTTTGCG
TCTGAAAGGATTCGTGGAAGATTGAGGTTGATCAAGCGAGAATCGTCTCTGTTCATTACCTGGATTCCTTACGAAGGACAAAACTCAAATGCGAAATTATCGAGA
ATTCGAATACGGAAAGGTTATGCATCTATGGGAGGGATGCAGAAGCTTTATTGTGCGTGTGCAGGGGAGAATGCTGCTGCTAACATCCCTCCTGGTACCCCATCC
TCATTACCACTGGATGATGGGACATATTACGTTCAACAAGATGAAGTCTTGTAG
Protein sequenceShow/hide protein sequence
MMRTDSGRGSSSRQPEGAEIVYSKENVTIQPTQFASERIRGRLRLIKRESSLFITWIPYEGQNSNAKLSRIRIRKGYASMGGMQKLYCACAGENAAANIPPGTPS
SLPLDDGTYYVQQDEVL