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Csor.00g273630 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g273630
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationCsor_Chr06:8060358..8061710
RNA-Seq ExpressionCsor.00g273630
SyntenyCsor.00g273630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]4.88e-3490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]6.94e-3490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]1.70e-3491.25Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]1.57e-39100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]8.11e-3388.89Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDLRREK EKEKAAKKLQAKKNKMKVDGSGKKKKG  GFQVGK+K+KTKLTA AKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein3.36e-3490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like2.36e-3490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162878.25e-3591.25Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
A0A6J1FV29 uncharacterized protein LOC1114471147.62e-40100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732887.62e-40100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein2.1e-2073.75Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNL++RK QHE++L++EK+ ++K  KKL A KNKMKVDGSGKKKKG  GF VGKKK+KTKLT  AKAKAAQAMELD
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAAAATAATCTTTCGCGCAGGAAGAATCAACATGAATTCGACCTTCGAAGGGAGAAACAAGAAAAAGAAAAGGCTGCGAAAAAGCTCCAAGCAAAG
AAGAACAAGATGAAGGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACTGCAGCGGCAAAA
GCAAAAGCAGCCCAGGCAATGGAACTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGAAAAATAATCTTTCGCGCAGGAAGAATCAACATGAATTCGACCTTCGAAGGGAGAAACAAGAAAAAGAAAAGGCTGCGAAAAAGCTCCAAGCAAAG
AAGAACAAGATGAAGGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACTGCAGCGGCAAAA
GCAAAAGCAGCCCAGGCAATGGAACTTGATAAATGA
Protein sequenceShow/hide protein sequence
MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK