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Csor.00g281170 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g281170
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationCsor_Chr19:10960793..10962013
RNA-Seq ExpressionCsor.00g281170
SyntenyCsor.00g281170
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572414.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia]2.51e-104100Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGRVKKCRMTLQI
        MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGRVKKCRMTLQI
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGRVKKCRMTLQI

Query:  AARSHGTRLWFPSASELRLRFVSLPELSGFVGVFTGREFAAGYVILLCG
        AARSHGTRLWFPSASELRLRFVSLPELSGFVGVFTGREFAAGYVILLCG
Subjt:  AARSHGTRLWFPSASELRLRFVSLPELSGFVGVFTGREFAAGYVILLCG

KAG7012013.1 Small ubiquitin-related modifier 1 [Cucurbita argyrosperma subsp. argyrosperma]1.13e-5192.55Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVN-----GFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG-RVK
        MDENKEAPIRKPEAEPGTNYVNVKVN     GFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDG+EIDAMKHHGGGGG RVK
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVN-----GFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG-RVK

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]1.61e-4275.7Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGT-NYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG
        MSTTMDEN+EAPIRKPEAEPG  NYVNVKVNG      + R        +   AYCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDGD+IDAMKHHGG
Subjt:  MSTTMDENKEAPIRKPEAEPGT-NYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG

Query:  GGG-RVK
        GGG RVK
Subjt:  GGG-RVK

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]1.97e-4375.49Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MSTTMDEN+EAP RKPEA+PGTNYVNVKVNG      + R        +    YCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GG
        GG
Subjt:  GG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]1.27e-4173.58Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGF--------VRGRNSV-----AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MSTTMDEN+EAP RKPEAEPG+ YVNVKVNG         +  R  +     AYCKRQA+EL TIAFLLDGHAI GNQTADELGMEDGDEIDAMKHHGGG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGF--------VRGRNSV-----AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GG-RVK
        GG RVK
Subjt:  GG-RVK

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 15.05e-2555.34Show/hide
Query:  MSTTMDENK-EAPIRKPEAEPGTNYVNVKVNG-------FVRGRNS------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG
        MST+M+    E   RK E +P + YVN+KVNG       F   + S       +YCKRQ +E  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTTMDENK-EAPIRKPEAEPGTNYVNVKVNG-------FVRGRNS------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG

Query:  GGG
        GGG
Subjt:  GGG

A0A6J1D1W9 small ubiquitin-related modifier 1-like1.51e-2352.13Show/hide
Query:  KEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG
        +E   RKPE+EP   YVN+KVNG      + R R          +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  KEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG

A0A6J1GLF8 Small ubiquitin-related modifier7.78e-4375.7Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGT-NYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG
        MSTTMDEN+EAPIRKPEAEPG  NYVNVKVNG      + R        +   AYCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDGD+IDAMKHHGG
Subjt:  MSTTMDENKEAPIRKPEAEPGT-NYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGG

Query:  GGG-RVK
        GGG RVK
Subjt:  GGG-RVK

A0A6J1HW85 small ubiquitin-related modifier 1-like isoform X11.91e-2768.67Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADEL
        MSTTMDEN+EAP RKPEA+PGTNYVNVKVNG      + R        +    YCKRQA+ELRTIAFLLDGHAIAGNQTADE+
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADEL

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X29.52e-4475.49Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MSTTMDEN+EAP RKPEA+PGTNYVNVKVNG      + R        +    YCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVR-------GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GG
        GG
Subjt:  GG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt38.9e-0634.52Show/hide
Query:  EAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        + +P T ++N+KV G      F + + +         YC RQ   + ++ FL+DG  I  +QT  EL MEDGD+I+A+    GG
Subjt:  EAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

P55852 Small ubiquitin-related modifier 17.0e-1143.14Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MS   +E+K     KP    G  ++N+KV G      F R + S        AYC RQ++++ +IAFL DG  +   QT DEL MEDGDEIDAM H  GG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GG
         G
Subjt:  GG

P55857 Small ubiquitin-related modifier 13.2e-1143Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MS   +E+K    +    E G  ++N+KV G      F R + S        AYC RQ++++  IAFL DG  + G QT DEL MEDGDEIDAM H  GG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Q9FLP5 Small ubiquitin-related modifier 33.4e-0548.94Show/hide
Query:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        YC R+ ++L   AF+ +G  I G +T DEL MEDGD IDA +   GG
Subjt:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Q9FLP6 Small ubiquitin-related modifier 25.4e-1142.72Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MS T +E+K     KP+      ++N+KV G      F R + S        AYC RQ+++  +IAFL DG  +   QT DEL MEDGDEIDAM H  GG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GGR
        G +
Subjt:  GGR

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 15.0e-1243.14Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MS   +E+K     KP    G  ++N+KV G      F R + S        AYC RQ++++ +IAFL DG  +   QT DEL MEDGDEIDAM H  GG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GG
         G
Subjt:  GG

AT5G55160.1 small ubiquitin-like modifier 23.8e-1242.72Show/hide
Query:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        MS T +E+K     KP+      ++N+KV G      F R + S        AYC RQ+++  +IAFL DG  +   QT DEL MEDGDEIDAM H  GG
Subjt:  MSTTMDENKEAPIRKPEAEPGTNYVNVKVNG------FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

Query:  GGR
        G +
Subjt:  GGR

AT5G55160.2 small ubiquitin-like modifier 23.2e-1158.82Show/hide
Query:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGR
        AYC RQ+++  +IAFL DG  +   QT DEL MEDGDEIDAM H  GGG +
Subjt:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGR

AT5G55170.1 small ubiquitin-like modifier 32.4e-0648.94Show/hide
Query:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        YC R+ ++L   AF+ +G  I G +T DEL MEDGD IDA +   GG
Subjt:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG

AT5G55856.1 Ubiquitin-like superfamily protein1.2e-0547.92Show/hide
Query:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG
        AY  +  +E+ T+ FL DG+ I  NQT +ELG+ED DEI+A     GG
Subjt:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAACGATGGATGAAAATAAGGAAGCACCGATCCGGAAACCCGAAGCAGAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGGATTTGTAAGAGGACGCAA
CTCAGTAGCGTACTGTAAACGACAAGCGATGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGCTTGGAATGGAGG
ATGGGGATGAAATTGATGCTATGAAACATCACGGCGGCGGCGGCGGAAGAGTAAAGAAGTGCCGTATGACACTCCAAATCGCAGCGAGAAGCCATGGAACTCGGCTGTGG
TTCCCATCCGCCAGTGAGCTCCGTCTCCGATTCGTCTCTTTACCGGAGCTATCTGGTTTCGTCGGGGTTTTTACTGGTCGGGAATTTGCAGCCGGTTATGTGATTCTCCT
GTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAACGATGGATGAAAATAAGGAAGCACCGATCCGGAAACCCGAAGCAGAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGGATTTGTAAGAGGACGCAA
CTCAGTAGCGTACTGTAAACGACAAGCGATGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGCTTGGAATGGAGG
ATGGGGATGAAATTGATGCTATGAAACATCACGGCGGCGGCGGCGGAAGAGTAAAGAAGTGCCGTATGACACTCCAAATCGCAGCGAGAAGCCATGGAACTCGGCTGTGG
TTCCCATCCGCCAGTGAGCTCCGTCTCCGATTCGTCTCTTTACCGGAGCTATCTGGTTTCGTCGGGGTTTTTACTGGTCGGGAATTTGCAGCCGGTTATGTGATTCTCCT
GTGTGGTTGA
Protein sequenceShow/hide protein sequence
MSTTMDENKEAPIRKPEAEPGTNYVNVKVNGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGRVKKCRMTLQIAARSHGTRLW
FPSASELRLRFVSLPELSGFVGVFTGREFAAGYVILLCG