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Csor.00g282930 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g282930
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationCsor_Chr16:179392..180478
RNA-Seq ExpressionCsor.00g282930
SyntenyCsor.00g282930
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]1.29e-62100Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
KAG7014698.1 hypothetical protein SDJN02_22327 [Cucurbita argyrosperma subsp. argyrosperma]1.24e-6096.97Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPTPS+AS G+PKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]3.23e-5489.8Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
        MAPT SVASDGE KWEF CD EVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]7.17e-6095.96Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PTPSVASDGEP WEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]5.47e-5589.9Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPT SVASDGE KWEFSCD EVDYESEKKASIVY AL+VDKELQPDKVKR M+VSDGKLSIH EAVEARFLRASFSAFVDVLTLATKT+EDFGQ VDF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein2.75e-5389.9Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT SVAS GEPKWEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQ  DF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A1S3CTG0 uncharacterized protein LOC1035041466.00e-5284.85Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT SVASDGE KWEFSCD EVDYESEKKASIVY AL+VDKELQPDKVKR M++S+GKLSIH EAVEARFLRASFS+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc16.00e-5284.85Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT SVASDGE KWEFSCD EVDYESEKKASIVY AL+VDKELQPDKVKR M++S+GKLSIH EAVEARFLRASFS+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A6J1CHJ5 uncharacterized protein LOC1110115641.57e-5489.8Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
        MAPT SVASDGE KWEF CD EVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
A0A6J1G2C3 uncharacterized protein LOC1114500281.26e-5386.87Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPT SV SDG+ KWEFSCD EVD ESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLRAS+SAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein1.9e-2863.16Show/hide
Query:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQ
        MA T    +  +  W+FSC+L+V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLS+H EA+EAR LRASFSAFVDVLTLAT+TI++FGQ
Subjt:  MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACACCTTCCGTCGCTTCTGATGGAGAGCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGC
TTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTG
CATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGACACCTTCCGTCGCTTCTGATGGAGAGCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGC
TTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTG
CATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGA
Protein sequenceShow/hide protein sequence
MAPTPSVASDGEPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF