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Csor.00g282950 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g282950
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2
Genome locationCsor_Chr16:171211..173021
RNA-Seq ExpressionCsor.00g282950
SyntenyCsor.00g282950
Gene Ontology termsGO:0042793 - plastid transcription (biological process)
GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR038958 - Protein plastid transcriptionally active 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576645.1 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subsp. sororia]9.54e-114100Show/hide
Query:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
        MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
Subjt:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD

Query:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
XP_022923082.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata]8.04e-10996.41Show/hide
Query:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
        MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
Subjt:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN

Query:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
XP_022923083.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata]5.30e-11198.17Show/hide
Query:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
        MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
Subjt:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD

Query:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
XP_023553434.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita pepo subsp. pepo]1.39e-10997.01Show/hide
Query:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
        MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
Subjt:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN

Query:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
XP_023553435.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita pepo subsp. pepo]9.16e-11298.78Show/hide
Query:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
        MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
Subjt:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD

Query:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
TrEMBL top hitse value%identityAlignment
A0A6J1E563 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X13.89e-10996.41Show/hide
Query:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
        MTTIPSLSFASP   RIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDN
Subjt:  MTTIPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDN

Query:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  RFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
A0A6J1E8L1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X22.26e-10392.02Show/hide
Query:  TTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDF
        T IP+LSFASPRI+ R G+SHGFN P RLQVAARKQ +GE VG RVWRRRKLTKKD+MSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDF
Subjt:  TTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDF

Query:  VNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        VNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  VNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
A0A6J1E8L6 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X22.57e-11198.17Show/hide
Query:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
        MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGE VG RVWRRRKLTKKDEMSIFKM+RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
Subjt:  MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD

Query:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
A0A6J1J2D6 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X29.59e-10594.41Show/hide
Query:  IPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVN
        IP+LSFASPRI+ R GISHGFN PPRLQVAARKQ +GE VG RVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVN
Subjt:  IPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVN

Query:  EVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        EVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  EVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
A0A6J1J5H1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X11.45e-10292.68Show/hide
Query:  IPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
        IP+LSFASP   RI+ R GISHGFN PPRLQVAARKQ +GE VG RVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD
Subjt:  IPSLSFASP---RIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD

Query:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Subjt:  FVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
SwissProt top hitse value%identityAlignment
Q8VZV9 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 71.3e-4572.73Show/hide
Query:  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRP
        G RVWRRR LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP
Subjt:  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRP

Query:  DAYAEEDPFKPGPHYLKQEFT
        +AY E DP+KPGP YL + +T
Subjt:  DAYAEEDPFKPGPHYLKQEFT
Arabidopsis top hitse value%identityAlignment
AT5G24314.1 plastid transcriptionally active79.0e-4772.73Show/hide
Query:  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRP
        G RVWRRR LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP
Subjt:  GPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRP

Query:  DAYAEEDPFKPGPHYLKQEFT
        +AY E DP+KPGP YL + +T
Subjt:  DAYAEEDPFKPGPHYLKQEFT
AT5G24314.2 plastid transcriptionally active71.4e-4468.22Show/hide
Query:  GPRVWRRRK--------LTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRV
        G RVWRRR         LTKKD+M  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRV
Subjt:  GPRVWRRRK--------LTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRV

Query:  NDAGFYRPDAYAEEDPFKPGPHYLKQEFT
        ND GF RP+AY E DP+KPGP YL + +T
Subjt:  NDAGFYRPDAYAEEDPFKPGPHYLKQEFT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACAATTCCATCACTCTCCTTTGCTTCACCTAGGATAGAGGTGAGGGTTGGAATTTCTCATGGATTTAACTCTCCTCCCCGGCTACAGGTGGCCGCCAGAAAGCA
GGGAAATGGTGAAGCTGTCGGGCCGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGAGATGTCGATCTTCAAAATGGATCGAATTCCATTCCTTGAAGAACAGG
TAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAG
GAATACGTGGAGAACAATCGTGACGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGGCCGGATGCATATGC
AGAAGAGGACCCATTTAAACCCGGACCTCATTACCTCAAACAAGAATTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACAATTCCATCACTCTCCTTTGCTTCACCTAGGATAGAGGTGAGGGTTGGAATTTCTCATGGATTTAACTCTCCTCCCCGGCTACAGGTGGCCGCCAGAAAGCA
GGGAAATGGTGAAGCTGTCGGGCCGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGAGATGTCGATCTTCAAAATGGATCGAATTCCATTCCTTGAAGAACAGG
TAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAG
GAATACGTGGAGAACAATCGTGACGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGGCCGGATGCATATGC
AGAAGAGGACCCATTTAAACCCGGACCTCATTACCTCAAACAAGAATTTACTTGA
Protein sequenceShow/hide protein sequence
MTTIPSLSFASPRIEVRVGISHGFNSPPRLQVAARKQGNGEAVGPRVWRRRKLTKKDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK
EYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT