; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g287100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g287100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRibosomal RNA processing protein 1 like protein A
Genome locationCsor_Chr14:8010104..8010491
RNA-Seq ExpressionCsor.00g287100
SyntenyCsor.00g287100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571281.1 hypothetical protein SDJN03_30196, partial [Cucurbita argyrosperma subsp. sororia]6.75e-2284.93Show/hide
Query:  EMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
        E SEMSEMSE+S++SEMFEMSEMF+M   SE+FEMF +MFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
Subjt:  EMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS

KAG6581647.1 hypothetical protein SDJN03_21649, partial [Cucurbita argyrosperma subsp. sororia]3.55e-46100Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
        MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS

KAG6592799.1 hypothetical protein SDJN03_12275, partial [Cucurbita argyrosperma subsp. sororia]2.31e-2274.19Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
        MSE S+MSEM E+S+M EM EMSEMSEMSE+S++SEM EMSEM EM  MSE+ EM  +M EM EMSEMSEMSEM EMSEMSEMS+MS+KSEMS
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS

KAG6603345.1 hypothetical protein SDJN03_03954, partial [Cucurbita argyrosperma subsp. sororia]6.63e-2475.27Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
        MSE+S+MSEM E+S+MFEM EMSEMSEMSE+S++SEM EMSEM EM EMSE+ EM  +M  MFEMSEMSEMSEM EMSEMSEMS+MS+ SEMS
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS

KAG6603390.1 hypothetical protein SDJN03_03999, partial [Cucurbita argyrosperma subsp. sororia]2.80e-2273.12Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS
        MSE+S MSEM E+S+MF+M EMSEMSEMSE+S++SEM EMSEM EM EMSEI EM     EMF+MSEMSEMSEM EMSEMS+MSKMS+  EMS
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS

TrEMBL top hitse value%identityAlignment
A0A0L0DKA1 Zinc finger protein9.72e-0952.22Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMY----EMSEMSEMSKM
        M E+ +M EM E+ +M EM EM EM EM E+ ++ EM EM EM EM EM E+ EM ++M EM EM EM EM EM     EM EM EM +M
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMY----EMSEMSEMSKM

A0A0L0DMA6 Uncharacterized protein2.00e-0952.69Show/hide
Query:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMF-EMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEM
        M E+ +M EM E+ +M EM EM EM EM E+ ++ EM  EM EM EM EM E+ EM ++M EM EM EM EM EM EM EM EM +M +  EM
Subjt:  MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMF-EMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEM

A0A3S0ZN99 Uncharacterized protein4.39e-0943.21Show/hide
Query:  EISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEM
        E+ ++ E+FE+ K+FE+FE+ E+ E+ E+ +L E+FE+ E+FE+FE+ E+FE+F ++FE+FE+ E+ E+ E++E+ E+ E+
Subjt:  EISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEM

A0A522MHA8 Uncharacterized protein8.52e-0855.56Show/hide
Query:  SEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYE
        SE+SE+SE+S+LSE+FE+SE+ E+ E+SE+FE+F ++FE+FE+ E+SE+S+++E
Subjt:  SEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYE

A0A7J7B6C4 Uncharacterized protein3.48e-0841.98Show/hide
Query:  EISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEM
        E+ ++ E+FE+ ++FE+FE+ E+ E+ E+ +L E+FE+ E+FE+FE+ E+FE+F ++FE+FE+ E+ E+ E++E+ E+ E+
Subjt:  EISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGATATCCAAGATGTCTGAGATGTTTGAGATCTCTAAGATGTTTGAGATGTTTGAGATGTCCGAGATGTCTGAGATGTCCGAAATATCAAAGCTGTCCGAAAT
GTTTGAAATGTCTGAGATGTTCGAGATGTTCGAGATGTCTGAGATTTTTGAGATGTTTTTAGATATGTTCGAGATGTTTGAGATGTCGGAGATGTCGGAGATGTCGGAGA
TGTATGAGATGTCTGAGATGTCCGAGATGTCCAAGATGTCCCAAAAGTCTGAGATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGATATCCAAGATGTCTGAGATGTTTGAGATCTCTAAGATGTTTGAGATGTTTGAGATGTCCGAGATGTCTGAGATGTCCGAAATATCAAAGCTGTCCGAAAT
GTTTGAAATGTCTGAGATGTTCGAGATGTTCGAGATGTCTGAGATTTTTGAGATGTTTTTAGATATGTTCGAGATGTTTGAGATGTCGGAGATGTCGGAGATGTCGGAGA
TGTATGAGATGTCTGAGATGTCCGAGATGTCCAAGATGTCCCAAAAGTCTGAGATGTCTTAG
Protein sequenceShow/hide protein sequence
MSEISKMSEMFEISKMFEMFEMSEMSEMSEISKLSEMFEMSEMFEMFEMSEIFEMFLDMFEMFEMSEMSEMSEMYEMSEMSEMSKMSQKSEMS