; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g288570 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g288570
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionGHD domain-containing protein
Genome locationCsor_Chr04:18163711..18167172
RNA-Seq ExpressionCsor.00g288570
SyntenyCsor.00g288570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602189.1 hypothetical protein SDJN03_07422, partial [Cucurbita argyrosperma subsp. sororia]1.50e-102100Show/hide
Query:  MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY
        MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY
Subjt:  MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY

Query:  IYVQGVDYEAKARTYKKKTCVLGRWCDSVSIFLAYVANVNDDTSNGFINGLS
        IYVQGVDYEAKARTYKKKTCVLGRWCDSVSIFLAYVANVNDDTSNGFINGLS
Subjt:  IYVQGVDYEAKARTYKKKTCVLGRWCDSVSIFLAYVANVNDDTSNGFINGLS
KAG7032873.1 hypothetical protein SDJN02_06923, partial [Cucurbita argyrosperma subsp. argyrosperma]1.51e-68100Show/hide
Query:  MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY
        MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY
Subjt:  MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVY

Query:  IYVQGVDYE
        IYVQGVDYE
Subjt:  IYVQGVDYE
XP_022939343.1 uncharacterized protein LOC111445286 isoform X1 [Cucurbita moschata]4.87e-1150.56Show/hide
Query:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
        + +I GL FSSI S YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL  VAN +  DTSNGF+NGLS
Subjt:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
XP_022939345.1 uncharacterized protein LOC111445286 isoform X2 [Cucurbita moschata]3.62e-1150.56Show/hide
Query:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
        + +I GL FSSI S YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL  VAN +  DTSNGF+NGLS
Subjt:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
XP_023550817.1 uncharacterized protein LOC111808847 [Cucurbita pepo subsp. pepo]4.87e-1150.56Show/hide
Query:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
        + +I GL FSSI S YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL  VAN +  DTSNGF+NGLS
Subjt:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
TrEMBL top hitse value%identityAlignment
A0A0A0K8Q9 Uncharacterized protein1.90e-0942Show/hide
Query:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKKKTC--------------------VLGRWCDSVSIFLAYVA-NVNDDTSNGFINGLS
        W  ++      + +I GL+FSSI S  IYVQGVDYEA    +K++                      VLG WCDS SIFL  V  +  +DTSNGF+NGLS
Subjt:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKKKTC--------------------VLGRWCDSVSIFLAYVA-NVNDDTSNGFINGLS
A0A4Y1RWX6 Uncharacterized protein1.07e-0845.24Show/hide
Query:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKKKT-C----VLGRWCDSVSIFLAYVANVNDDTS--NGFING
        W  ++      + +I GL FSS+ S YIY+QGVDYE     +K+ + C    VLG WCDS SIF+A V     DTS   GF NG
Subjt:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKKKT-C----VLGRWCDSVSIFLAYVANVNDDTS--NGFING
A0A6J1BXM2 uncharacterized protein LOC1110066419.02e-0943Show/hide
Query:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLA-YVANVN-DDTSNGFINGL
        W  ++      + +I GL FSSI+  YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL   VAN + +DT NGF+NGL
Subjt:  WLLIASGSRVFELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLA-YVANVN-DDTSNGFINGL
A0A6J1FLD9 uncharacterized protein LOC111445286 isoform X12.36e-1150.56Show/hide
Query:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
        + +I GL FSSI S YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL  VAN +  DTSNGF+NGLS
Subjt:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
A0A6J1FMG0 uncharacterized protein LOC111445286 isoform X21.75e-1150.56Show/hide
Query:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
        + +I GL FSSI S YIYVQGVDYE     +K+                 K+C   VLG WCDS SIFL  VAN +  DTSNGF+NGLS
Subjt:  ELQIMGLTFSSIHSVYIYVQGVDYEAKARTYKK-----------------KTC---VLGRWCDSVSIFLAYVANVND-DTSNGFINGLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGGCGAAGAAGAGTCTGAGGAAGGCGGTTGTGCCGCCTACTCTCGTCGGCATTCCTTCTCCCGGAAACCTCCAGCCACTCGTCTCACCCTCCATTAAC
GCATCTCTCCTTCTTTACCGGCTATTCATCAACCCTAAGCCTTTTCTTTTCCATCTCTTTCAATGTCTCTCAAGCTTTCTCACTGTCTTGGTTAGTCCGGATCGT
TCTTCGTGCTGGCTCCTCATCGCTTCTGGTTCCCGTGTTTTTGAACTCCAGATTATGGGACTGACCTTCTCATCCATCCACTCTGTTTACATTTATGTCCAGGGA
GTTGACTATGAGGCAAAGGCAAGAACATACAAAAAGAAAACTTGTGTTCTAGGCAGATGGTGTGATTCAGTTAGCATCTTCTTGGCGTATGTTGCTAACGTCAAC
GACGACACATCAAATGGTTTCATCAATGGCCTTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGGCGAAGAAGAGTCTGAGGAAGGCGGTTGTGCCGCCTACTCTCGTCGGCATTCCTTCTCCCGGAAACCTCCAGCCACTCGTCTCACCCTCCATTAAC
GCATCTCTCCTTCTTTACCGGCTATTCATCAACCCTAAGCCTTTTCTTTTCCATCTCTTTCAATGTCTCTCAAGCTTTCTCACTGTCTTGGTTAGTCCGGATCGT
TCTTCGTGCTGGCTCCTCATCGCTTCTGGTTCCCGTGTTTTTGAACTCCAGATTATGGGACTGACCTTCTCATCCATCCACTCTGTTTACATTTATGTCCAGGGA
GTTGACTATGAGGCAAAGGCAAGAACATACAAAAAGAAAACTTGTGTTCTAGGCAGATGGTGTGATTCAGTTAGCATCTTCTTGGCGTATGTTGCTAACGTCAAC
GACGACACATCAAATGGTTTCATCAATGGCCTTTCCTGA
Protein sequenceShow/hide protein sequence
MLKAKKSLRKAVVPPTLVGIPSPGNLQPLVSPSINASLLLYRLFINPKPFLFHLFQCLSSFLTVLVSPDRSSCWLLIASGSRVFELQIMGLTFSSIHSVYIYVQG
VDYEAKARTYKKKTCVLGRWCDSVSIFLAYVANVNDDTSNGFINGLS