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Csor.00g292010 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g292010
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptioncytochrome c oxidase subunit 6b-3-like
Genome locationCsor_Chr19:3820641..3825813
RNA-Seq ExpressionCsor.00g292010
SyntenyCsor.00g292010
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571754.1 hypothetical protein SDJN03_28482, partial [Cucurbita argyrosperma subsp. sororia]8.81e-60100Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKNSLSLRAKSGIRIKR
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKNSLSLRAKSGIRIKR
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKNSLSLRAKSGIRIKR

XP_022932983.1 cytochrome c oxidase subunit 6b-3-like [Cucurbita moschata]2.34e-3480.72Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGN DRRHGGKDKD KV       TA      PF N
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN

XP_022973259.1 cytochrome c oxidase subunit 6b-3-like [Cucurbita maxima]1.23e-2976.19Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS-ASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS ASSAQTNLDGNG+ RHGGKD+  KV       TA      PF N
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS-ASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN

XP_023542925.1 cytochrome c oxidase subunit 6b-3-like isoform X1 [Cucurbita pepo subsp. pepo]7.08e-3496.88Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKV
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKD+D KV
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKV

XP_023542926.1 cytochrome c oxidase subunit 6b-3-like isoform X2 [Cucurbita pepo subsp. pepo]6.88e-3496.88Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKV
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKD+D KV
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKV

TrEMBL top hitse value%identityAlignment
A0A0A0LEH8 Uncharacterized protein1.08e-2167.09Show/hide
Query:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGD-RRHGGKDKDIKVAKLFASFTARELQVIPFKN
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS  SAQTNLDGN D RR G +D+D KV       TA      PF N
Subjt:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGD-RRHGGKDKDIKVAKLFASFTARELQVIPFKN

A0A1S3CQ05 putative cytochrome c oxidase subunit 6b-like6.88e-1762.5Show/hide
Query:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGG--KDKDIKVAKLFASFTARELQVIPFKN
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S  SAQTN D    RR G   KDKD KV       TA      PF N
Subjt:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGG--KDKDIKVAKLFASFTARELQVIPFKN

A0A5D3E4S8 Putative cytochrome c oxidase subunit 6b-like6.88e-1762.5Show/hide
Query:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGG--KDKDIKVAKLFASFTARELQVIPFKN
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S  SAQTN D    RR G   KDKD KV       TA      PF N
Subjt:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGG--KDKDIKVAKLFASFTARELQVIPFKN

A0A6J1F3D0 cytochrome c oxidase subunit 6b-3-like1.13e-3480.72Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGN DRRHGGKDKD KV       TA      PF N
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN

A0A6J1IE20 cytochrome c oxidase subunit 6b-3-like5.94e-3076.19Show/hide
Query:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS-ASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN
        MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS ASSAQTNLDGNG+ RHGGKD+  KV       TA      PF N
Subjt:  MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSS-ASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKN

SwissProt top hitse value%identityAlignment
Q9LPJ2 Putative cytochrome c oxidase subunit 6b-like5.4e-0446.03Show/hide
Query:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLF
        R RDISKVARG+QAPRP H  GTVS  PPP + +   A+        R   G++ D  V + F
Subjt:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLF

Arabidopsis top hitse value%identityAlignment
AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein3.8e-0546.03Show/hide
Query:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLF
        R RDISKVARG+QAPRP H  GTVS  PPP + +   A+        R   G++ D  V + F
Subjt:  RPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGCCTCAGCGACCCAGAGACATCAGCAAGGTGGCTCGCGGCGAGCAAGCCCCAAGGCCTGTTCACGAATACGGCACCGTTTCGAAGCCTCCGCCGCCCTCTTC
CTCCTCCGCTTCCTCCGCCCAGACCAACCTCGACGGTAACGGCGATCGCCGCCATGGTGGCAAAGACAAAGACATTAAGGTTGCTAAATTGTTCGCAAGTTTCACTGCTC
GCGAGCTGCAAGTGATTCCTTTCAAGAATTCACTTTCGTTAAGAGCAAAGAGTGGAATTAGAATCAAGCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGCCTCAGCGACCCAGAGACATCAGCAAGGTGGCTCGCGGCGAGCAAGCCCCAAGGCCTGTTCACGAATACGGCACCGTTTCGAAGCCTCCGCCGCCCTCTTC
CTCCTCCGCTTCCTCCGCCCAGACCAACCTCGACGGTAACGGCGATCGCCGCCATGGTGGCAAAGACAAAGACATTAAGGTTGCTAAATTGTTCGCAAGTTTCACTGCTC
GCGAGCTGCAAGTGATTCCTTTCAAGAATTCACTTTCGTTAAGAGCAAAGAGTGGAATTAGAATCAAGCGTTGA
Protein sequenceShow/hide protein sequence
MSAPQRPRDISKVARGEQAPRPVHEYGTVSKPPPPSSSSASSAQTNLDGNGDRRHGGKDKDIKVAKLFASFTARELQVIPFKNSLSLRAKSGIRIKR