; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g293260 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g293260
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpolyamine-modulated factor 1-binding protein 1
Genome locationCsor_Chr10:9043058..9043351
RNA-Seq ExpressionCsor.00g293260
SyntenyCsor.00g293260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571252.1 hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sororia]1.47e-4383.16Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV
        MD VGDRICRL ESERLKNVEI RLKDENN LV KVEEEREKWM VCCERD IK N  GLLEEIG L KKMIEMEKNERRAL+E EDLKVKC+ V
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV

KAG6586283.1 hypothetical protein SDJN03_19016, partial [Cucurbita argyrosperma subsp. sororia]1.28e-4278.95Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV
        M+E+G  ICRLVESER+KNVEIGRLK ENNGLV KVEEEREKWMKVCCERD IK ++DGL EE G LR+KM+EMEKNERRAL+E EDLKVKCK++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV

KAG6590400.1 hypothetical protein SDJN03_15823, partial [Cucurbita argyrosperma subsp. sororia]2.63e-61100Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS
        MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS

XP_022971789.1 uncharacterized protein LOC111470467 [Cucurbita maxima]3.07e-4581.44Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS
        MDEVGDRICRLVESERLKNV+IGRLKDENNGLV KVEEEREKW+KVC ERDEI+ NYDGL +EI  LRKKMIEMEKNE+R L+ETE LKVKCK++++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS

XP_023524531.1 uncharacterized protein LOC111788427 [Cucurbita pepo subsp. pepo]9.91e-4584.21Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV
        MDEVGDRICRL+ESERLKN +IGRLKDENNGLV KVEEEREKW KVC ERD IK N DGL EEIG LRKKMIEMEKNE+RAL+ETEDLKVKCK++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV

TrEMBL top hitse value%identityAlignment
A0A5D3D489 Cingulin1.64e-2760.82Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS
        ++E+   I  L+ESER+K +EI  LK E NGLV +VEEEREKW  VCCERDEIK  +DGLL+E G LR K++EME+NERR L+E +DLK KCK+++S
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS

A0A6J1FD80 polyamine-modulated factor 1-binding protein 11.53e-4078.95Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV
        M+E+G  ICRLVESER+KNVEIGRLK ENNGLV KVEEEREKWMKVCCERD IK ++DGL EE G LR+KM+EMEKNERRAL+E EDLKVKCK++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV

A0A6J1HKX2 polyamine-modulated factor 1-binding protein 15.40e-3876.84Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV
        M+E+G  ICRLVESER KNVEIGRLK ENNGLV K EEEREKWMKVC ERD IK ++DGL EE G LR+KM+EMEKNERRAL+E EDLKVKCK++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEV

A0A6J1I2X9 protein MNN4-like8.78e-4178.35Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDG-LLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVV
        M+EVGDRICRLVESERLKNVEI RLKD+NNGLV KVEEEREKWMKVCCERD IK N D  L EE   LRKKMIE+EKNE+RAL+E EDL+VKCK+++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDG-LLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVV

A0A6J1I9J8 uncharacterized protein LOC1114704671.48e-4581.44Show/hide
Query:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS
        MDEVGDRICRLVESERLKNV+IGRLKDENNGLV KVEEEREKW+KVC ERDEI+ NYDGL +EI  LRKKMIEMEKNE+R L+ETE LKVKCK++++
Subjt:  MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05130.1 BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1)8.6e-0539.71Show/hide
Query:  LVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNE
        LV+ +  +  EI  LK E   L  KVE E+E+  KVC ERD IK  +D   EE+  L++ ++ +E+ E
Subjt:  LVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNE

AT5G27330.1 Prefoldin chaperone subunit family protein8.3e-0835.63Show/hide
Query:  EVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLK
        E+G  +  L + +  +  EI  LK E NGL+ K+E ERE++ +VC ERD +K+ +D   EE+  L++ ++ +E  E    +E   LK
Subjt:  EVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATTGGGAGATTGAAAGATGAGAATAATGGGCTTGTGTTTAAA
GTTGAGGAAGAAAGGGAGAAATGGATGAAGGTTTGTTGTGAGAGGGATGAAATTAAGACTAATTATGATGGATTGCTTGAGGAAATAGGATATTTGAGAAAGAAA
ATGATTGAAATGGAGAAAAATGAGAGAAGGGCTTTAAAAGAGACAGAGGATTTGAAGGTGAAATGCAAAGAAGTTGTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATTGGGAGATTGAAAGATGAGAATAATGGGCTTGTGTTTAAA
GTTGAGGAAGAAAGGGAGAAATGGATGAAGGTTTGTTGTGAGAGGGATGAAATTAAGACTAATTATGATGGATTGCTTGAGGAAATAGGATATTTGAGAAAGAAA
ATGATTGAAATGGAGAAAAATGAGAGAAGGGCTTTAAAAGAGACAGAGGATTTGAAGGTGAAATGCAAAGAAGTTGTCAGCTGA
Protein sequenceShow/hide protein sequence
MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS