; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g295560 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g295560
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
Genome locationCsor_Chr05:3540724..3541041
RNA-Seq ExpressionCsor.00g295560
SyntenyCsor.00g295560
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD27572.1 TPA_asm: hypothetical protein HUJ06_029040 [Nelumbo nucifera]8.53e-0649.09Show/hide
Query:  TPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG
        T  P++  RL+ LQR+VPG   + D++ LFQRTADYI AL+L+++ LK L   +G
Subjt:  TPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG

KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]3.81e-4980Show/hide
Query:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
        MRSIHSFR RRQAT+ + LKP+RRRR+KL+HLPK+T SSS +SA    TTPS AMHKRLRNLQRLVPGH H+T+LNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL

KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]3.06e-66100Show/hide
Query:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
        MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
Subjt:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL

OMP08066.1 hypothetical protein COLO4_06805 [Corchorus olitorius]9.34e-0735.58Show/hide
Query:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
        MRS  S R RR+   T   K  R R++ L +LP N  S S         +   ++ ++L  LQR++P   ++ +++ LFQ TADYI  L+ K+++L++L+
Subjt:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT

Query:  SFYG
        +FYG
Subjt:  SFYG

XP_039792937.1 uncharacterized protein LOC120658853 [Panicum virgatum]2.70e-0642.19Show/hide
Query:  AAATGTTPSPAMH---KRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG
        A+  G T  P  H   +RLR L+++VP  + D D++ L +RTADYI  L+LK+ +L+ L++ YG
Subjt:  AAATGTTPSPAMH---KRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG

TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein3.00e-5080Show/hide
Query:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
        MRSIHSFR RRQAT+ + LKP+RRRR+KL+HLPK+T SSS +SA    TTPS AMHKRLRNLQRLVPGH H+T+LNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL

A0A1R3KLV4 Uncharacterized protein4.52e-0735.58Show/hide
Query:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT
        MRS  S R RR+   T   K  R R++ L +LP N  S S         +   ++ ++L  LQR++P   ++ +++ LFQ TADYI  L+ K+++L++L+
Subjt:  MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLT

Query:  SFYG
        +FYG
Subjt:  SFYG

A0A7N0RGC2 Uncharacterized protein3.26e-0852.54Show/hide
Query:  TTPSPA--MHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYGL
        T PSPA  + +RLR LQR+VPG +HD  +  LF+RTADYI  L+ K+  L++L+S  GL
Subjt:  TTPSPA--MHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYGL

A0A7N2L281 Uncharacterized protein6.52e-0840.24Show/hide
Query:  RRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG
        RRR +++    K    S   ++AA  TT    + ++LR LQ+++PG N + DL  LF R A+YI +LQ+K+NILK++++ YG
Subjt:  RRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG

B6TLX1 Uncharacterized protein7.52e-0643.08Show/hide
Query:  SAAATGTTPSPAMHK---RLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG
        +AAA  T   P  H    RLR L+++VP      D++ L +RTADYI AL+LKL +L+ +++ YG
Subjt:  SAAATGTTPSPAMHK---RLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTATCCACTCATTCCGACAAAGAAGACAAGCCACCTCCACTGCCAATCTCAAACCCACAAGAAGGAGAAGGCTAAAGCTTGTTCACCTCCCAAAAAAC
ACCACCTCCTCCTCCGCCATCTCCGCCGCAGCCACCGGAACAACCCCCTCCCCCGCCATGCACAAACGGCTGAGAAATCTGCAGAGGCTGGTCCCCGGCCACAAC
CATGATACCGACCTCAACCACTTGTTTCAAAGAACTGCAGATTACATCCAGGCTTTACAACTTAAGCTCAACATCCTCAAAGATCTCACCTCTTTCTATGGCCTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCTATCCACTCATTCCGACAAAGAAGACAAGCCACCTCCACTGCCAATCTCAAACCCACAAGAAGGAGAAGGCTAAAGCTTGTTCACCTCCCAAAAAAC
ACCACCTCCTCCTCCGCCATCTCCGCCGCAGCCACCGGAACAACCCCCTCCCCCGCCATGCACAAACGGCTGAGAAATCTGCAGAGGCTGGTCCCCGGCCACAAC
CATGATACCGACCTCAACCACTTGTTTCAAAGAACTGCAGATTACATCCAGGCTTTACAACTTAAGCTCAACATCCTCAAAGATCTCACCTCTTTCTATGGCCTT
TGA
Protein sequenceShow/hide protein sequence
MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLRNLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYGL