; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g296440 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g296440
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhloem filament protein
Genome locationCsor_Chr01:5433763..5434119
RNA-Seq ExpressionCsor.00g296440
SyntenyCsor.00g296440
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588756.1 hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]5.73e-1940.43Show/hide
Query:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI
        C  KWIPI ++   C+  VAKFA+E+++  H+E++  K I  GW++E+    + +RLH+EV   LG V   +V+V EK+V   ++R LES + I
Subjt:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI

KAG6588757.1 hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]1.34e-1740.43Show/hide
Query:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI
        C  KWI I D+   C+  VAKFA+E+++  H+E++  K I  GW++E+    + YRLH+EV   LG +   +V+V EK+    +IR LES + I
Subjt:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI

KAG6588758.1 hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]9.50e-1840.43Show/hide
Query:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI
        C  KWI I D+   C+  +AKFA+E+++  H+E++  K I  GW++E+    + YRLHIEV   LG +    V+V EK+    +IR LES + I
Subjt:  CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI

KAG6607542.1 hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]1.21e-1943.82Show/hide
Query:  LGLGLGFNLGFPD---RPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLG
        +GL LG NLGF D   RP+    C+ KW+ I +L   C+ ++++FA+EE++  +R+N   + I   WYLE+DA SVKYRLHI+V+  + 
Subjt:  LGLGLGFNLGFPD---RPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLG

KAG6607543.1 hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]2.02e-86100Show/hide
Query:  MSIGLGLGLGFNLGFPDRPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVL
        MSIGLGLGLGFNLGFPDRPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVL
Subjt:  MSIGLGLGLGFNLGFPDRPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVL

Query:  EKRVECGRIRSLESFRHI
        EKRVECGRIRSLESFRHI
Subjt:  EKRVECGRIRSLESFRHI

TrEMBL top hitse value%identityAlignment
A0A0A0K7B3 Phloem filament protein5.53e-1235.56Show/hide
Query:  NEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESF
        N+KWI I D    C+  + K+A+++++K H++N   K +  GWYLEID    K RL IEV +  G V  +EV+++    +  ++++  SF
Subjt:  NEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESF

A0A5D3D2J2 Phloem filament protein4.21e-1435.79Show/hide
Query:  CGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRH
        CG  ++WI I D    C+ +VAK A+ +H+K   +N   K +  GW+LEID +++K+RL+IEV +  G V    ++++    +  R+R+L S  H
Subjt:  CGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRH

A0A6J1EI90 uncharacterized protein LOC1114345925.58e-1237.37Show/hide
Query:  CG---CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI
        CG     EKWI I D+   C+ +VAK A+E+ +  H  +   + I  GWY E+   ++KYRLHI     L     +E +V E++ +  RIR L SF +I
Subjt:  CG---CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI

A0A6J1EIQ8 uncharacterized protein LOC1114345179.73e-1644.94Show/hide
Query:  EKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESF
        EKWI I D+   CL QVAKFA+E+ +  H +      I  GWYLE+ + ++KYRLHI+    LG +  +EV+V E++ +  RIR L SF
Subjt:  EKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESF

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X25.58e-1237.37Show/hide
Query:  CG---CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI
        CG     EKWI I D+   C+ +VAK A+E+ +  H  +   + I  GWY E+   ++KYRLHI     L     +E +V E++ +  RIR L SF +I
Subjt:  CG---CNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCGGATTGGGATTGGGATTGGGCTTCAACCTTGGTTTTCCTGATCGTCCAAAACCGGATTGCGGTTGTAATGAAAAATGGATACCAATCCAAGATCTCGGTAT
GGAGTGCTTGCACCAAGTTGCAAAGTTTGCGCTGGAAGAGCACCATAAGAATCATCGGGAAAATTGGGCACTGAAAGGTATATCTGGAGGTTGGTATTTGGAAATCGACG
CGTATAGTGTAAAGTACCGTCTCCATATTGAAGTGTCAAGCCGTTTAGGATTTGTGAGAAGGCATGAAGTTATTGTGCTTGAAAAGAGAGTTGAGTGTGGAAGAATCAGG
TCACTCGAGTCGTTCAGGCATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCGGATTGGGATTGGGATTGGGCTTCAACCTTGGTTTTCCTGATCGTCCAAAACCGGATTGCGGTTGTAATGAAAAATGGATACCAATCCAAGATCTCGGTAT
GGAGTGCTTGCACCAAGTTGCAAAGTTTGCGCTGGAAGAGCACCATAAGAATCATCGGGAAAATTGGGCACTGAAAGGTATATCTGGAGGTTGGTATTTGGAAATCGACG
CGTATAGTGTAAAGTACCGTCTCCATATTGAAGTGTCAAGCCGTTTAGGATTTGTGAGAAGGCATGAAGTTATTGTGCTTGAAAAGAGAGTTGAGTGTGGAAGAATCAGG
TCACTCGAGTCGTTCAGGCATATATAA
Protein sequenceShow/hide protein sequence
MSIGLGLGLGFNLGFPDRPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIR
SLESFRHI