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Csor.00g303260 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g303260
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionimportin-9
Genome locationCsor_Chr18:11690863..11691383
RNA-Seq ExpressionCsor.00g303260
SyntenyCsor.00g303260
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsIPR001494 - Importin-beta, N-terminal domain
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3950435.1 hypothetical protein CMV_023812, partial [Castanea mollissima]1.96e-3287.88Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
        MANVIDQDQQWLLNCLSATLDPN EVRSFAE SLNQASLQPGFG ALSKV ANRELP+GLRQ++ V
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
KAG6574009.1 hypothetical protein SDJN03_27896, partial [Cucurbita argyrosperma subsp. sororia]1.89e-45100Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFSA
        MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFSA
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFSA
KAG6601339.1 Importin-9, partial [Cucurbita argyrosperma subsp. sororia]5.72e-3489.47Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFS
        MANVIDQDQQWL+N LSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQISFVV AI+IL FS
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFS
KAG7032125.1 Importin-9, partial [Cucurbita argyrosperma subsp. argyrosperma]3.92e-3168.32Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG------------------------FGVALSKVTANRELPVGLRQISFVVVAIEILNFS
        MANVIDQDQQWL+N LSATLDPN EVRSFAE SLNQASLQPG                        FGVALSKV ANRELPVGLRQISFVV AI+IL FS
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG------------------------FGVALSKVTANRELPVGLRQISFVVVAIEILNFS

Query:  A
        A
Subjt:  A
TYK09061.1 importin-9 isoform X1 [Cucumis melo var. makuwa]1.13e-3187.32Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIE
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQISFV+  + 
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIE
TrEMBL top hitse value%identityAlignment
A0A0A0KQZ8 Importin N-terminal domain-containing protein7.88e-3089.39Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQ++ V
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
A0A1S3BF85 importin-9 isoform X17.88e-3089.39Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQ++ V
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
A0A1S3BFX2 importin-9 isoform X27.85e-3089.39Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQ++ V
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
A0A5D3CB26 Importin-9 isoform X15.45e-3287.32Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIE
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPGFGVALSKV ANRELPVGLRQISFV+  + 
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIE
A0A6J1D5R8 importin-91.08e-2987.88Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
        MANVIDQDQQWLLNCLSATLDPN EVRS+AE SLNQASLQPGFGVALSK++ANRELPVGLRQ++ V
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26170.1 ARM repeat superfamily protein3.6e-2273.85Show/hide
Query:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVV
        V+DQDQQWLL CLSA+LDPNQ VRSFAETSLNQASLQPGFG AL +V AN++L +GLRQ++ V++
Subjt:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGC
ATCTCTCCAACCAGGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCAGTAGGATTGCGCCAGATATCCTTTGTTGTCGTTGCAATTGAGATTCTTA
ATTTTTCTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGC
ATCTCTCCAACCAGGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCAGTAGGATTGCGCCAGATATCCTTTGTTGTCGTTGCAATTGAGATTCTTA
ATTTTTCTGCGTGA
Protein sequenceShow/hide protein sequence
MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGFGVALSKVTANRELPVGLRQISFVVVAIEILNFSA