; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g304860 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g304860
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
Genome locationCsor_Chr18:12599985..12601340
RNA-Seq ExpressionCsor.00g304860
SyntenyCsor.00g304860
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013222.1 hypothetical protein SDJN02_25980 [Cucurbita argyrosperma subsp. argyrosperma]1.08e-65100Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
XP_022945615.1 uncharacterized protein LOC111449801 [Cucurbita moschata]3.04e-84100Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPINC
        VPQMENRAAEEEDEEDHPTSPINC
Subjt:  VPQMENRAAEEEDEEDHPTSPINC
XP_022968364.1 uncharacterized protein LOC111467625 [Cucurbita maxima]2.93e-8298.39Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGR+DGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPINC
        VPQMENRAAEEEDEEDH TSPINC
Subjt:  VPQMENRAAEEEDEEDHPTSPINC
XP_022984701.1 uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]2.12e-5475.61Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        M SHVQFS+T PFWT+EKH+HFLNSMEASFVRSM++N +HRRRLRL+R L DTADSTLDS QK RK H  +  G RMDGRSSRRSRRI SLP  SIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPIN
        VPQME RA E+EDE DHP SP+N
Subjt:  VPQMENRAAEEEDEEDHPTSPIN
XP_023542542.1 uncharacterized protein LOC111802424 [Cucurbita pepo subsp. pepo]1.02e-82100Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPIN
        VPQMENRAAEEEDEEDHPTSPIN
Subjt:  VPQMENRAAEEEDEEDHPTSPIN
TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein2.49e-5371.54Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        M SHVQF++TGP WT+EKH+HFLNS+EASFVRSM++N  HRR LRL+RLLPDTADSTLDS   + KN HPT+G  R++GRS+RRSRRISS P  S QDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPIN
        VPQME RA E+EDE DHP SP+N
Subjt:  VPQMENRAAEEEDEEDHPTSPIN
A0A6J1G1G2 uncharacterized protein LOC1114498011.47e-84100Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPINC
        VPQMENRAAEEEDEEDHPTSPINC
Subjt:  VPQMENRAAEEEDEEDHPTSPINC
A0A6J1HZF8 uncharacterized protein LOC1114676251.42e-8298.39Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGR+DGRSSRRSRRISSLPPISIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPINC
        VPQMENRAAEEEDEEDH TSPINC
Subjt:  VPQMENRAAEEEDEEDHPTSPINC
A0A6J1J606 uncharacterized protein LOC111482903 isoform X21.03e-5475.61Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        M SHVQFS+T PFWT+EKH+HFLNSMEASFVRSM++N +HRRRLRL+R L DTADSTLDS QK RK H  +  G RMDGRSSRRSRRI SLP  SIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPIN
        VPQME RA E+EDE DHP SP+N
Subjt:  VPQMENRAAEEEDEEDHPTSPIN
A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X12.14e-5475.61Show/hide
Query:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV
        M SHVQFS+T PFWT+EKH+HFLNSMEASFVRSM++N +HRRRLRL+R L DTADSTLDS QK RK H  + G  RMDGRSSRRSRRI SLP  SIQDQV
Subjt:  MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQV

Query:  VPQMENRAAEEEDEEDHPTSPIN
        VPQME RA E+EDE DHP SP+N
Subjt:  VPQMENRAAEEEDEEDHPTSPIN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCACGTGCAATTCAGCAAAACGGGGCCGTTTTGGACCGATGAAAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCCATGTACGAAAA
TCTGCACCATCGCCGCCGTCTACGGTTGAACCGCCTCCTCCCGGACACTGCTGACTCAACCCTAGATTCGCATCAGAAGTACAGGAAAAACCACCATCCTACCGCCGGAG
GTGGCAGAATGGACGGTAGATCTAGCAGGAGATCGAGGAGGATATCATCTCTACCGCCCATTTCAATTCAAGATCAGGTGGTCCCACAAATGGAAAATAGAGCAGCTGAG
GAAGAAGATGAGGAAGACCATCCAACGTCACCTATCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGCACGTGCAATTCAGCAAAACGGGGCCGTTTTGGACCGATGAAAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCCATGTACGAAAA
TCTGCACCATCGCCGCCGTCTACGGTTGAACCGCCTCCTCCCGGACACTGCTGACTCAACCCTAGATTCGCATCAGAAGTACAGGAAAAACCACCATCCTACCGCCGGAG
GTGGCAGAATGGACGGTAGATCTAGCAGGAGATCGAGGAGGATATCATCTCTACCGCCCATTTCAATTCAAGATCAGGTGGTCCCACAAATGGAAAATAGAGCAGCTGAG
GAAGAAGATGAGGAAGACCATCCAACGTCACCTATCAATTGCTAA
Protein sequenceShow/hide protein sequence
MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAGGGRMDGRSSRRSRRISSLPPISIQDQVVPQMENRAAE
EEDEEDHPTSPINC