; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g306560 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g306560
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionFn3_like domain-containing protein
Genome locationCsor_Chr05:2449135..2449593
RNA-Seq ExpressionCsor.00g306560
SyntenyCsor.00g306560
Gene Ontology termsGO:0031222 - arabinan catabolic process (biological process)
GO:0045493 - xylan catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0009044 - xylan 1,4-beta-xylosidase activity (molecular function)
GO:0046556 - alpha-L-arabinofuranosidase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily
IPR036962 - Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR044993 - Beta-D-xylosidase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598672.1 putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. sororia]1.23e-101100Show/hide
Query:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW
        MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW
Subjt:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW

Query:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP
        WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP
Subjt:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP

KAG7029617.1 putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. argyrosperma]5.03e-10199.34Show/hide
Query:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW
        MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRL LDEKILQLVNDAPAIPRLGIPAHEW
Subjt:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW

Query:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP
        WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP
Subjt:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP

XP_022961999.1 probable beta-D-xylosidase 7 isoform X2 [Cucurbita moschata]6.72e-6582.22Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        MELQKLLLSAAVFSALLSLS+VQT+AQPRYACDTSNPLT TLPFC+TS+ +  R RD+VSRL LDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        YGI   GTI AAT FPQVILTAA+FDA LWYQIGQ
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

XP_023546008.1 probable beta-D-xylosidase 7 isoform X2 [Cucurbita pepo subsp. pepo]8.05e-6374.83Show/hide
Query:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW
        MASSSSSSFP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN LT TLPFC+TS+ +  R RD+VSRL LDEKILQLVN APAIPRLGIPA+EW
Subjt:  MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEW

Query:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        WSEALHG+A  GYGI   GTI AAT FPQVILTAA+FDA LWYQIGQ
Subjt:  WSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

XP_038884772.1 probable beta-D-xylosidase 7 [Benincasa hispida]1.09e-6374.82Show/hide
Query:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL
        FP +++LQKLLLSAAVFSALLSL    +++QP YACD+SNP+TKTLPFC+TS+P+++R RD+VSRL LDEK+LQLVN APAIPRLGIPA+EWWSEALHG+
Subjt:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL

Query:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        A  GYGI   GTIPAAT FPQVILTAA+FD  LWYQIGQ
Subjt:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

TrEMBL top hitse value%identityAlignment
A0A1S3BD89 probable beta-D-xylosidase 72.70e-5871.94Show/hide
Query:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL
        FP +++LQ LLLSAA     LSL    +++QP YACD+SNPLTKTLPFC+TS+P++ R RD+VSRL LDEK+LQLVN APAIPRLGIPA+EWWSEALHG+
Subjt:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL

Query:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        AD GYGI   GTIPAAT FPQVILTAA+FD  LWYQIGQ
Subjt:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

A0A5A7VG12 Putative beta-D-xylosidase 72.70e-5871.94Show/hide
Query:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL
        FP +++LQ LLLSAA     LSL    +++QP YACD+SNPLTKTLPFC+TS+P++ R RD+VSRL LDEK+LQLVN APAIPRLGIPA+EWWSEALHG+
Subjt:  FPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGL

Query:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        AD GYGI   GTIPAAT FPQVILTAA+FD  LWYQIGQ
Subjt:  ADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

A0A6J1HDG0 probable beta-D-xylosidase 7 isoform X17.35e-5972.6Show/hide
Query:  ASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWW
        +SSSSSSFP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN    TLPFC+TS+ +  R RD+VSRL LDEKILQLVN APAIPRLGIPA+EWW
Subjt:  ASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWW

Query:  SEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        SEALHG+A  GYGI   GTI AAT FPQVILTAA+FDA LWYQIGQ
Subjt:  SEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

A0A6J1HFL6 probable beta-D-xylosidase 7 isoform X23.25e-6582.22Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        MELQKLLLSAAVFSALLSLS+VQT+AQPRYACDTSNPLT TLPFC+TS+ +  R RD+VSRL LDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        YGI   GTI AAT FPQVILTAA+FDA LWYQIGQ
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

A0A6J1KCT6 probable beta-D-xylosidase 71.04e-6173.61Show/hide
Query:  SSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSE
        SSSS FP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN LT TLPFC+TS+ +  R RD+VSRL LDEK+LQLVN APAIPRLGIPA+EWWSE
Subjt:  SSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSE

Query:  ALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ
        ALHG+A  GYGI   GTIPAAT FPQVILTAA+FDA LWYQIGQ
Subjt:  ALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ

SwissProt top hitse value%identityAlignment
Q94KD8 Probable beta-D-xylosidase 28.7e-3351.8Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        M L K+   A +   L+S S+V   ++  +ACDT +  T TL FC+ S+P+ ERVRD++ RL L EK+  L N A AIPRLGI  +EWWSEALHG+++ G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESN
         G  F G  PAAT FPQVI T A+F+A LW  IG+V SN
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESN

Q9FGY1 Beta-D-xylosidase 14.3e-3253.23Show/hide
Query:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF
        LL L     + +P +ACD +N LT+TL FC+ ++P+  RV+D++ RL L EKI  LVN+A A+PRLGI  +EWWSEALHG++D G G  F G  P AT F
Subjt:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF

Query:  PQVILTAATFDAKLWYQIGQVESN
        PQVI TAA+F+  LW +IG+V S+
Subjt:  PQVILTAATFDAKLWYQIGQVESN

Q9LJN4 Probable beta-D-xylosidase 52.1e-3150.41Show/hide
Query:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF
        +++L +    +Q  +ACD S P T    FC  S+  E R +D+VSRL+L EK+ QLVN A  +PRLG+P +EWWSEALHG++D G G+ F GT+P AT F
Subjt:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF

Query:  PQVILTAATFDAKLWYQIGQVES
        P  ILTAA+F+  LW ++G+V S
Subjt:  PQVILTAATFDAKLWYQIGQVES

Q9LXA8 Probable beta-D-xylosidase 64.9e-2847.76Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        M LQ  L+S   F++ ++ +     + P++ C    P   + PFC  S+ +++R   +VS L L EKI QL N A ++PRLGIP +EWWSE+LHGLAD G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIG
         G+SF G+I AAT FPQVI++AA+F+  LWY+IG
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIG

Q9SGZ5 Probable beta-D-xylosidase 71.7e-3663.39Show/hide
Query:  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAAT
        +A P ++CD SNP TK   FC+T +P+ +R RD+VSRL +DEKI QLVN AP IPRLG+PA+EWWSEALHG+A  G GI F GT+ AAT FPQVILTAA+
Subjt:  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAAT

Query:  FDAKLWYQIGQV
        FD+  W++I QV
Subjt:  FDAKLWYQIGQV

Arabidopsis top hitse value%identityAlignment
AT1G02640.1 beta-xylosidase 26.2e-3451.8Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        M L K+   A +   L+S S+V   ++  +ACDT +  T TL FC+ S+P+ ERVRD++ RL L EK+  L N A AIPRLGI  +EWWSEALHG+++ G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESN
         G  F G  PAAT FPQVI T A+F+A LW  IG+V SN
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESN

AT1G78060.1 Glycosyl hydrolase family protein1.2e-3763.39Show/hide
Query:  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAAT
        +A P ++CD SNP TK   FC+T +P+ +R RD+VSRL +DEKI QLVN AP IPRLG+PA+EWWSEALHG+A  G GI F GT+ AAT FPQVILTAA+
Subjt:  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAAT

Query:  FDAKLWYQIGQV
        FD+  W++I QV
Subjt:  FDAKLWYQIGQV

AT3G19620.1 Glycosyl hydrolase family protein1.5e-3250.41Show/hide
Query:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF
        +++L +    +Q  +ACD S P T    FC  S+  E R +D+VSRL+L EK+ QLVN A  +PRLG+P +EWWSEALHG++D G G+ F GT+P AT F
Subjt:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF

Query:  PQVILTAATFDAKLWYQIGQVES
        P  ILTAA+F+  LW ++G+V S
Subjt:  PQVILTAATFDAKLWYQIGQVES

AT5G10560.1 Glycosyl hydrolase family protein3.5e-2947.76Show/hide
Query:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG
        M LQ  L+S   F++ ++ +     + P++ C    P   + PFC  S+ +++R   +VS L L EKI QL N A ++PRLGIP +EWWSE+LHGLAD G
Subjt:  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFG

Query:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIG
         G+SF G+I AAT FPQVI++AA+F+  LWY+IG
Subjt:  YGISFRGTIPAATLFPQVILTAATFDAKLWYQIG

AT5G49360.1 beta-xylosidase 13.1e-3353.23Show/hide
Query:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF
        LL L     + +P +ACD +N LT+TL FC+ ++P+  RV+D++ RL L EKI  LVN+A A+PRLGI  +EWWSEALHG++D G G  F G  P AT F
Subjt:  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLF

Query:  PQVILTAATFDAKLWYQIGQVESN
        PQVI TAA+F+  LW +IG+V S+
Subjt:  PQVILTAATFDAKLWYQIGQVESN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTCCTCCTCCTCCTTCCCTAGGAGAATGGAACTCCAAAAACTCCTTCTCTCCGCCGCCGTTTTCTCTGCCCTCCTTTCCCTCTCCGCCGTGCAAACGGC
GGCTCAGCCGCGGTACGCCTGCGACACTTCCAACCCACTCACGAAAACTCTCCCATTCTGCAAAACCTCTATGCCGATGGAGGAAAGAGTCCGCGATGTGGTCTCTCGAC
TCGCATTGGACGAGAAGATCCTGCAGCTCGTCAACGATGCTCCGGCGATCCCCCGTCTCGGCATTCCCGCCCACGAGTGGTGGTCGGAGGCCCTCCATGGCCTCGCCGAT
TTCGGCTACGGCATCAGCTTCAGGGGTACCATCCCCGCCGCCACCTTGTTCCCCCAGGTCATTCTTACTGCTGCTACCTTCGATGCCAAGCTCTGGTACCAGATCGGACA
GGTCGAATCAAATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCTCCTCCTCCTCCTTCCCTAGGAGAATGGAACTCCAAAAACTCCTTCTCTCCGCCGCCGTTTTCTCTGCCCTCCTTTCCCTCTCCGCCGTGCAAACGGC
GGCTCAGCCGCGGTACGCCTGCGACACTTCCAACCCACTCACGAAAACTCTCCCATTCTGCAAAACCTCTATGCCGATGGAGGAAAGAGTCCGCGATGTGGTCTCTCGAC
TCGCATTGGACGAGAAGATCCTGCAGCTCGTCAACGATGCTCCGGCGATCCCCCGTCTCGGCATTCCCGCCCACGAGTGGTGGTCGGAGGCCCTCCATGGCCTCGCCGAT
TTCGGCTACGGCATCAGCTTCAGGGGTACCATCCCCGCCGCCACCTTGTTCCCCCAGGTCATTCTTACTGCTGCTACCTTCGATGCCAAGCTCTGGTACCAGATCGGACA
GGTCGAATCAAATCCCTAA
Protein sequenceShow/hide protein sequence
MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLAD
FGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP