; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g308030 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g308030
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCsor_Chr05:1508751..1509764
RNA-Seq ExpressionCsor.00g308030
SyntenyCsor.00g308030
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598523.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.68e-231100Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

KAG6598526.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.16e-250100Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRVCLDCHACRICRTWVG
        AKLGRLSASYDVFGEVGCADRVCLDCHACRICRTWVG
Subjt:  AKLGRLSASYDVFGEVGCADRVCLDCHACRICRTWVG

XP_022961715.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucurbita moschata]7.14e-22397.52Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFLFPTKNSIRL QECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCR IHARVIKS LYRDGFIGDQLVSC
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYA DAQKVFDDMPDRDLVSWNSLI G SRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFA KIGVSLEVKVVNSLINMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTN CAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

XP_022997515.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucurbita maxima]3.39e-22296.27Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFL PTKNS RLRQECSILYNFFNQSRTQYPLLLRPFHPIR CVAAEALVSALVIAVKSCTSISSCR IHARVIKSFLYRDGFIGDQLV+C
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYAEDAQKVFDDMPDRDLVSWNSLI G SRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRY+HGFA KIGVSLEVKVVNS INMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAA VTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQI IATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

XP_023546177.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]8.10e-21694.72Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVF CGFCSLFL PTK SIRLRQE SILYNFFN+SRTQYPLLL  FH IRQCVAAE LVSALVIAVKSCTSISSCR IHARVIKSFLYRDGFIGDQLV+C
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYAEDAQKVFDDMPDRDLVSWNSLI G SRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRY+HGFA KIGVSLEVKVVNSLINMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAA VTNGCAGEGVHCFNKMRMFG+EPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

TrEMBL top hitse value%identityAlignment
A0A0A0LKE6 DYW_deaminase domain-containing protein5.46e-17278.95Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL-RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVS
        MVF     SLFLFPT  S+ LR   SILYNFF QSRTQYPLLL R FH +RQC   EA+VSAL+IAV SC SIS+CR IHARV KS LYRDGFIGDQLV+
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL-RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVS

Query:  CYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMY
        CYNKLGYAEDA K+FDDMP +DLVSWNSLISG SRCLH++L AF TMKFEMSVKPNEVTILSMISAC+GALD G+Y+HGF  K+G +LEVKV NSLINMY
Subjt:  CYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMY

Query:  GKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDL
        GKSGDLTSACRLFEAIP PN VSWNSIIAA VTNGCA EG+  FNKMR  G+E DEGTILALLQAC+HLGVGKLAESIHGL+FC+G GA+ITIATALLD 
Subjt:  GKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDL

Query:  YAKLGRLSASYDVFGEVGCADRV
        YAKLGRLSASY VF EVG ADRV
Subjt:  YAKLGRLSASYDVFGEVGCADRV

A0A1S3BBW7 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like1.07e-17981.48Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL--RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLV
        MVF    CSLFLFPTK SI LR++ SILYNFF QSRTQYPLLL  R FH IR C A+EALVS L+IAVKSCTSIS+CR IHARV KS LYRDGFIGDQLV
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL--RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLV

Query:  SCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINM
        +CYNKLGYAEDAQK+FDDMP +DLVSWNSLISG SRCLH+TL AF TMKFEMS+KPNEVTILSMISACNGALD G+Y+HGFA K+G +LEVKV NSLINM
Subjt:  SCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINM

Query:  YGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLD
        YGKSGDLTSACRLFEAIP PN VSWNSIIAA VTNGCA EG+  FNKMR FG+E DEGTILALLQAC+HLGVGKLAESIH L+FC+G GA+ITIATALLD
Subjt:  YGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLD

Query:  LYAKLGRLSASYDVFGEVGCADRV
         YAKLGRLSAS DVF EVG ADRV
Subjt:  LYAKLGRLSASYDVFGEVGCADRV

A0A5A7VB72 Pentatricopeptide repeat-containing protein9.93e-17880.86Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL--RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLV
        MVF    CSLFLFPTK SI LR++ SILYNFF QSRTQYPLLL  R FH IR C A+EALVS L+IAVKSCTSIS+CR IHARV KS LYRDGFIGDQLV
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLL--RPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLV

Query:  SCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINM
        +CYNKLGYAEDAQK+FDDMP +DLVSWNSLISG SRCLH+TL AF TMKFEMS+KPNEVTILSMISACNGALD G+Y+HGFA K+G +LEVKV NSLINM
Subjt:  SCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINM

Query:  YGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLD
        YGKSGDLTSACRLFEAI  PN VSWNSIIAA VTNGCA EG+  FNKMR FG+E DEGTILALLQAC+HLGVGKLAESIH L+FC+G GA+ TIATALLD
Subjt:  YGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLD

Query:  LYAKLGRLSASYDVFGEVGCADRV
         YAKLGRLSAS DVF EVG ADRV
Subjt:  LYAKLGRLSASYDVFGEVGCADRV

A0A6J1HD36 pentatricopeptide repeat-containing protein At5g40410, mitochondrial3.46e-22397.52Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFLFPTKNSIRL QECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCR IHARVIKS LYRDGFIGDQLVSC
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYA DAQKVFDDMPDRDLVSWNSLI G SRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFA KIGVSLEVKVVNSLINMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTN CAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

A0A6J1K9V7 pentatricopeptide repeat-containing protein At5g40410, mitochondrial1.64e-22296.27Show/hide
Query:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC
        MVFLCGFCSLFL PTKNS RLRQECSILYNFFNQSRTQYPLLLRPFHPIR CVAAEALVSALVIAVKSCTSISSCR IHARVIKSFLYRDGFIGDQLV+C
Subjt:  MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSC

Query:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG
        YNKLGYAEDAQKVFDDMPDRDLVSWNSLI G SRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRY+HGFA KIGVSLEVKVVNS INMYG
Subjt:  YNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYG

Query:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY
        KSGDLTSACRLFEAIPYPNIVSWNSIIAA VTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQI IATALLDLY
Subjt:  KSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLY

Query:  AKLGRLSASYDVFGEVGCADRV
        AKLGRLSASYDVFGEVGCADRV
Subjt:  AKLGRLSASYDVFGEVGCADRV

SwissProt top hitse value%identityAlignment
Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic4.6e-3432.66Show/hide
Query:  RRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLI-----SGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNG--
        + IH  ++KS    D F    L + Y K     +A+KVFD MP+RDLVSWN+++     +G++R     +K+ C    E ++KP+ +TI+S++ A +   
Subjt:  RRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLI-----SGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNG--

Query:  ALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHL
         + VG+ +HG+A + G    V +  +L++MY K G L +A +LF+ +   N+VSWNS+I A+V N    E +  F KM   G++P + +++  L AC  L
Subjt:  ALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHL

Query:  GVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV
        G  +    IH L    GL   +++  +L+ +Y K   +  +  +FG++
Subjt:  GVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV

Q9CAY1 Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial1.3e-3332.42Show/hide
Query:  VKSCTSIS---SCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVS--WNSLISGLSRCLHVTLKAFCTMKF-EMSVKPNEVTI
        +KSC S+S   S +++H  V K     + F+   L+S Y K G   DA+KVF++ P    +S  +N+LISG +    VT  A+   +  E  V  + VT+
Subjt:  VKSCTSIS---SCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVS--WNSLISGLSRCLHVTLKAFCTMKF-EMSVKPNEVTI

Query:  LSMISACN--GALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGT
        L ++  C     L +GR +HG   K G+  EV V+NS I MY K G + +  RLF+ +P   +++WN++I+ +  NG A + +  + +M+  G+ PD  T
Subjt:  LSMISACN--GALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGT

Query:  ILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVF
        ++++L +C HLG  K+   +  L+  +G    + ++ A + +YA+ G L+ +  VF
Subjt:  ILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVF

Q9FND6 Pentatricopeptide repeat-containing protein At5g40410, mitochondrial2.9e-7353.11Show/hide
Query:  EALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISG------LSRCLHVTLKAFCTMKFE
        +A VS+L+ AVKSC SI  CR +H +V+KS  YR GFIGDQLV CY +LG+   A+K+FD+MP+RDLVSWNSLISG      L +C  V  +    M  E
Subjt:  EALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISG------LSRCLHVTLKAFCTMKFE

Query:  MSVKPNEVTILSMISAC--NGALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMR
        +  +PNEVT LSMISAC   G+ + GR +HG   K GV  EVKVVN+ IN YGK+GDLTS+C+LFE +   N+VSWN++I  H+ NG A +G+  FN  R
Subjt:  MSVKPNEVTILSMISAC--NGALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMR

Query:  MFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCAD
          G EPD+ T LA+L++C  +GV +LA+ IHGLI   G      I TALLDLY+KLGRL  S  VF E+   D
Subjt:  MFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCAD

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.4e-3835.74Show/hide
Query:  YRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRC--LHVTLKAFCTMKFEMSVKPNEVTILSMISAC--NGALDVGRYVHGFASKI
        +RD      L+  Y   GY E+AQK+FD++P +D+VSWN++ISG +        L+ F  M  + +V+P+E T+++++SAC  +G++++GR VH +    
Subjt:  YRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRC--LHVTLKAFCTMKFEMSVKPNEVTILSMISAC--NGALDVGRYVHGFASKI

Query:  GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLI--
        G    +K+VN+LI++Y K G+L +AC LFE +PY +++SWN++I  +       E +  F +M   G  P++ T+L++L AC HLG   +   IH  I  
Subjt:  GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLI--

Query:  FCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV
           G+    ++ T+L+D+YAK G + A++ VF  +
Subjt:  FCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV

Q9SS97 Putative pentatricopeptide repeat-containing protein At3g015808.4e-3633.09Show/hide
Query:  LVIAVKSC---TSISSCRRIHARVIKSF-LYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSR--CLHVTLKAFCTMKFEMSVKPN
        L +A+K+C     ++    IH  V K   L  D ++G  L+  Y K G   +A ++FD++   D+V+W+S++SG  +    +  ++ F  M     V P+
Subjt:  LVIAVKSC---TSISSCRRIHARVIKSF-LYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSR--CLHVTLKAFCTMKFEMSVKPN

Query:  EVTILSMISACNGALD--VGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEP
         VT+++++SAC    +  +GR VHGF  + G S ++ +VNSL+N Y KS     A  LF+ I   +++SW+++IA +V NG A E +  FN M   G EP
Subjt:  EVTILSMISACNGALD--VGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEP

Query:  DEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCADRV
        +  T+L +LQAC      +     H L    GL  ++ ++TAL+D+Y K      +Y VF  +   D V
Subjt:  DEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCADRV

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.8e-4035.74Show/hide
Query:  YRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRC--LHVTLKAFCTMKFEMSVKPNEVTILSMISAC--NGALDVGRYVHGFASKI
        +RD      L+  Y   GY E+AQK+FD++P +D+VSWN++ISG +        L+ F  M  + +V+P+E T+++++SAC  +G++++GR VH +    
Subjt:  YRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSRC--LHVTLKAFCTMKFEMSVKPNEVTILSMISAC--NGALDVGRYVHGFASKI

Query:  GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLI--
        G    +K+VN+LI++Y K G+L +AC LFE +PY +++SWN++I  +       E +  F +M   G  P++ T+L++L AC HLG   +   IH  I  
Subjt:  GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLI--

Query:  FCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV
           G+    ++ T+L+D+YAK G + A++ VF  +
Subjt:  FCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV

AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-3532.66Show/hide
Query:  RRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLI-----SGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNG--
        + IH  ++KS    D F    L + Y K     +A+KVFD MP+RDLVSWN+++     +G++R     +K+ C    E ++KP+ +TI+S++ A +   
Subjt:  RRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLI-----SGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNG--

Query:  ALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHL
         + VG+ +HG+A + G    V +  +L++MY K G L +A +LF+ +   N+VSWNS+I A+V N    E +  F KM   G++P + +++  L AC  L
Subjt:  ALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHL

Query:  GVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV
        G  +    IH L    GL   +++  +L+ +Y K   +  +  +FG++
Subjt:  GVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEV

AT3G01580.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.9e-3733.09Show/hide
Query:  LVIAVKSC---TSISSCRRIHARVIKSF-LYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSR--CLHVTLKAFCTMKFEMSVKPN
        L +A+K+C     ++    IH  V K   L  D ++G  L+  Y K G   +A ++FD++   D+V+W+S++SG  +    +  ++ F  M     V P+
Subjt:  LVIAVKSC---TSISSCRRIHARVIKSF-LYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISGLSR--CLHVTLKAFCTMKFEMSVKPN

Query:  EVTILSMISACNGALD--VGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEP
         VT+++++SAC    +  +GR VHGF  + G S ++ +VNSL+N Y KS     A  LF+ I   +++SW+++IA +V NG A E +  FN M   G EP
Subjt:  EVTILSMISACNGALD--VGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEP

Query:  DEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCADRV
        +  T+L +LQAC      +     H L    GL  ++ ++TAL+D+Y K      +Y VF  +   D V
Subjt:  DEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCADRV

AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein9.5e-3532.42Show/hide
Query:  VKSCTSIS---SCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVS--WNSLISGLSRCLHVTLKAFCTMKF-EMSVKPNEVTI
        +KSC S+S   S +++H  V K     + F+   L+S Y K G   DA+KVF++ P    +S  +N+LISG +    VT  A+   +  E  V  + VT+
Subjt:  VKSCTSIS---SCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVS--WNSLISGLSRCLHVTLKAFCTMKF-EMSVKPNEVTI

Query:  LSMISACN--GALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGT
        L ++  C     L +GR +HG   K G+  EV V+NS I MY K G + +  RLF+ +P   +++WN++I+ +  NG A + +  + +M+  G+ PD  T
Subjt:  LSMISACN--GALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGT

Query:  ILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVF
        ++++L +C HLG  K+   +  L+  +G    + ++ A + +YA+ G L+ +  VF
Subjt:  ILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVF

AT5G40410.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.1e-7453.11Show/hide
Query:  EALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISG------LSRCLHVTLKAFCTMKFE
        +A VS+L+ AVKSC SI  CR +H +V+KS  YR GFIGDQLV CY +LG+   A+K+FD+MP+RDLVSWNSLISG      L +C  V  +    M  E
Subjt:  EALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSCYNKLGYAEDAQKVFDDMPDRDLVSWNSLISG------LSRCLHVTLKAFCTMKFE

Query:  MSVKPNEVTILSMISAC--NGALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMR
        +  +PNEVT LSMISAC   G+ + GR +HG   K GV  EVKVVN+ IN YGK+GDLTS+C+LFE +   N+VSWN++I  H+ NG A +G+  FN  R
Subjt:  MSVKPNEVTILSMISAC--NGALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMR

Query:  MFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCAD
          G EPD+ T LA+L++C  +GV +LA+ IHGLI   G      I TALLDLY+KLGRL  S  VF E+   D
Subjt:  MFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGEVGCAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTTTGTGTGGATTTTGCTCGTTGTTTCTGTTTCCTACAAAAAACTCCATCCGCCTTCGCCAGGAATGTTCAATTCTGTACAATTTCTTCAACCAATCA
AGAACACAGTACCCACTTCTTCTTCGGCCATTTCACCCGATTCGTCAATGCGTAGCTGCAGAAGCGCTTGTTTCAGCGTTAGTGATCGCGGTAAAATCGTGCACT
TCCATCTCAAGTTGCCGGCGAATTCATGCCCGTGTAATCAAGTCTTTTCTTTATAGAGATGGATTCATTGGGGATCAGCTGGTCTCTTGTTATAATAAACTGGGT
TATGCTGAGGATGCACAGAAGGTGTTTGATGATATGCCTGATAGAGATTTGGTTTCTTGGAACTCACTGATTTCTGGGCTTTCCCGGTGCCTTCATGTAACTCTC
AAAGCCTTTTGTACCATGAAGTTTGAAATGTCGGTTAAACCCAATGAGGTAACAATTCTATCGATGATATCGGCTTGCAACGGAGCTTTGGATGTAGGGAGGTAT
GTTCATGGCTTTGCAAGTAAAATTGGTGTTTCTTTGGAAGTTAAGGTCGTTAATTCTCTCATTAACATGTATGGAAAGTCTGGGGATTTAACATCTGCTTGTAGA
TTATTTGAGGCTATTCCATACCCAAATATAGTGTCGTGGAATTCAATCATTGCTGCTCATGTTACTAATGGCTGTGCAGGAGAAGGAGTTCATTGTTTTAATAAG
ATGAGAATGTTTGGAATGGAGCCGGATGAAGGAACTATCCTGGCTCTGCTTCAAGCTTGCGTGCATTTGGGTGTAGGAAAGTTGGCTGAAAGCATTCATGGGTTA
ATCTTCTGCTCTGGTCTAGGTGCACAAATCACCATAGCCACTGCACTTTTAGATTTGTATGCGAAATTGGGAAGATTAAGTGCTTCATATGATGTCTTTGGGGAG
GTGGGTTGTGCAGACAGAGTTTGCTTGGACTGCCATGCTTGCAGGATATGCCGCACATGGGTTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTTTGTGTGGATTTTGCTCGTTGTTTCTGTTTCCTACAAAAAACTCCATCCGCCTTCGCCAGGAATGTTCAATTCTGTACAATTTCTTCAACCAATCA
AGAACACAGTACCCACTTCTTCTTCGGCCATTTCACCCGATTCGTCAATGCGTAGCTGCAGAAGCGCTTGTTTCAGCGTTAGTGATCGCGGTAAAATCGTGCACT
TCCATCTCAAGTTGCCGGCGAATTCATGCCCGTGTAATCAAGTCTTTTCTTTATAGAGATGGATTCATTGGGGATCAGCTGGTCTCTTGTTATAATAAACTGGGT
TATGCTGAGGATGCACAGAAGGTGTTTGATGATATGCCTGATAGAGATTTGGTTTCTTGGAACTCACTGATTTCTGGGCTTTCCCGGTGCCTTCATGTAACTCTC
AAAGCCTTTTGTACCATGAAGTTTGAAATGTCGGTTAAACCCAATGAGGTAACAATTCTATCGATGATATCGGCTTGCAACGGAGCTTTGGATGTAGGGAGGTAT
GTTCATGGCTTTGCAAGTAAAATTGGTGTTTCTTTGGAAGTTAAGGTCGTTAATTCTCTCATTAACATGTATGGAAAGTCTGGGGATTTAACATCTGCTTGTAGA
TTATTTGAGGCTATTCCATACCCAAATATAGTGTCGTGGAATTCAATCATTGCTGCTCATGTTACTAATGGCTGTGCAGGAGAAGGAGTTCATTGTTTTAATAAG
ATGAGAATGTTTGGAATGGAGCCGGATGAAGGAACTATCCTGGCTCTGCTTCAAGCTTGCGTGCATTTGGGTGTAGGAAAGTTGGCTGAAAGCATTCATGGGTTA
ATCTTCTGCTCTGGTCTAGGTGCACAAATCACCATAGCCACTGCACTTTTAGATTTGTATGCGAAATTGGGAAGATTAAGTGCTTCATATGATGTCTTTGGGGAG
GTGGGTTGTGCAGACAGAGTTTGCTTGGACTGCCATGCTTGCAGGATATGCCGCACATGGGTTGGGTAG
Protein sequenceShow/hide protein sequence
MVFLCGFCSLFLFPTKNSIRLRQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVSALVIAVKSCTSISSCRRIHARVIKSFLYRDGFIGDQLVSCYNKLG
YAEDAQKVFDDMPDRDLVSWNSLISGLSRCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHGFASKIGVSLEVKVVNSLINMYGKSGDLTSACR
LFEAIPYPNIVSWNSIIAAHVTNGCAGEGVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLDLYAKLGRLSASYDVFGE
VGCADRVCLDCHACRICRTWVG