; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g310380 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g310380
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCsor_Chr17:2440255..2442584
RNA-Seq ExpressionCsor.00g310380
SyntenyCsor.00g310380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575164.1 hypothetical protein SDJN03_25803, partial [Cucurbita argyrosperma subsp. sororia]1.14e-187100Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
        ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS

KAG7013721.1 hypothetical protein SDJN02_23888, partial [Cucurbita argyrosperma subsp. argyrosperma]6.05e-13185.78Show/hide
Query:  SDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAP
        S+AVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAP
Subjt:  SDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAP

Query:  SWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFRISLHPMMFFLRL
        SWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIRE                                ARKIQIAGYEEGDTDQFRISLHPMMFFLRL
Subjt:  SWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFRISLHPMMFFLRL

Query:  SYQSETAWFCKTMDGSHTIISIPASHFNLEYV
        SYQSETAWFCKTMDGSHTIISIPASHFNLEYV
Subjt:  SYQSETAWFCKTMDGSHTIISIPASHFNLEYV

KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.50e-5642.74Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLV+L+   PL DA  L  Q+S +ADV+FT  M SL  S+ S RF+  L +   LF  YSVD     ++SL +F  ++ DGGS+SSM+  + E+R +M+
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        L + N +S N P  H EL L P +   +G+VE  K F + ++  R II+E+  F +D +R+  T  +VKFS+ASKEI +TK++   +I GYE  D  +  
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFP
        I+  PMMFFL  +Y++   WF KT + S ++IS+PA     +YVVYFP
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFP

XP_022958858.1 uncharacterized protein LOC111460013 [Cucurbita moschata]4.69e-16099.12Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIR+TLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGS
        ISLHPMMFFLRLSYQSETAWFCKTMDG+
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGS

XP_023006008.1 uncharacterized protein LOC111498886 [Cucurbita maxima]3.92e-17995.79Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLVKLEDVTPLSDAVFLFNQLSLE DVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL TFQK LWDG SYSSMTFLMHETRSRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        LEFHNSA PN PSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVS FPND IR+TLTHLQVKFSVA+KEIILTKQARKIQIAGYEEGDTDQFR
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
        ISLHPM FFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS

TrEMBL top hitse value%identityAlignment
A0A6J1DM64 uncharacterized protein LOC1110222791.51e-5039.36Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MF ++L  +  + +A  +  Q+S  AD  F+ + FS+   N S RF   L +    F+ YSVD N C R+ + +F+ ++ +G  + SMT       + M+
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSW-HRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQF
        L F    SP+  ++  R+LTL  S+  D+G V+ EK F I + DFR IIRE++ + + PI  TLT  QV+F +A +EI+LTK+     I GY+     QF
Subjt:  LEFHNSASPNAPSW-HRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQF

Query:  RISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFP
        ++SL PM+FF+ LSYQSE  WF KT +   T+I +PA  F  +YV+YFP
Subjt:  RISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFP

A0A6J1H2Z8 uncharacterized protein LOC1114600115.60e-5343.32Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLV+L    PL +A  +  Q+S EAD+KF+ + FSL  S  S RF+    I    FA Y VD N   R+SL +F  +++ G  +SSMT    ET SRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        L+F +S +      HR L L PS+E ++G+++ ++ F I ++DFR II  + SFPN+ I ++LT  +VKF  AS+E ILTK+  +  I GYE      F+
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYF
        I+L+P  FF  LSY +   WF KT+D S  +I IPA   N +YV+YF
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYF

A0A6J1H490 uncharacterized protein LOC1114600132.27e-16099.12Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIR+TLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGS
        ISLHPMMFFLRLSYQSETAWFCKTMDG+
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGS

A0A6J1KZ05 uncharacterized protein LOC1114988873.10e-5544.13Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLV+L    PL +A  L  Q+S EAD+KF+ + FSL  S  S RF+    I    FA YSVD N   R+SL +F  +++DG  +SSMT    ET SRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        L+F +S        HR L L PS+E ++G+++ ++ F I ++DFR II  + SFPN+ I ++LT  +VKF  AS+E ILTK+  +  I GYE      F+
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYF
        I+L+P  FF  LSY +   WF KT+D S  +I +PA   N +YV+YF
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYF

A0A6J1L3R4 uncharacterized protein LOC1114988861.90e-17995.79Show/hide
Query:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV
        MFLVKLEDVTPLSDAVFLFNQLSLE DVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL TFQK LWDG SYSSMTFLMHETRSRMV
Subjt:  MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMV

Query:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR
        LEFHNSA PN PSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVS FPND IR+TLTHLQVKFSVA+KEIILTKQARKIQIAGYEEGDTDQFR
Subjt:  LEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFR

Query:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
        ISLHPM FFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS
Subjt:  ISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTT
AACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCGGAATATTCAGTCGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAA
CTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAAT
GCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACAT
TATAAGAGAAGTATCTTCATTCCCAAATGATCCAATTCGTATTACTCTAACTCATTTACAAGTCAAATTCTCTGTTGCATCCAAGGAAATTATTCTTACTAAACAGGCTC
GAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGG
TTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCTCATGATAGGGAAAATATTATATACAC
AAATGGAGTATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTT
AACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCGGAATATTCAGTCGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAA
CTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAAT
GCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACAT
TATAAGAGAAGTATCTTCATTCCCAAATGATCCAATTCGTATTACTCTAACTCATTTACAAGTCAAATTCTCTGTTGCATCCAAGGAAATTATTCTTACTAAACAGGCTC
GAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGG
TTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCTCATGATAGGGAAAATATTATATACAC
AAATGGAGTATCCTAG
Protein sequenceShow/hide protein sequence
MFLVKLEDVTPLSDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPN
APSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYEEGDTDQFRISLHPMMFFLRLSYQSETAW
FCKTMDGSHTIISIPASHFNLEYVVYFPHDRENIIYTNGVS