CuGenDBv2

Gene ID	Cucsat.G10033
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	ferredoxin-thioredoxin reductase, variable chain
Genome location	ctg1673:3595231..3598348
RNA-Seq Expression	Cucsat.G10033
Synteny	Cucsat.G10033
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0016310 - phosphorylation (biological process) GO:0030148 - sphingolipid biosynthetic process (biological process) GO:0003951 - NAD+ kinase activity (molecular function) GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domains	IPR004207 - Ferredoxin thioredoxin reductase, alpha chain IPR008990 - Electron transport accessory-like domain superfamily IPR044166 - Ferredoxin-thioredoxin reductase, variable chain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034101.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]

3.83e-98

92.82

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

XP_004147092.1 ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus]

1.47e-114

100

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

XP_008445916.1 PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]

3.04e-107

92.82

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

2.04e-95

86.19

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCSIRRGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

XP_038893043.1 ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]

7.48e-108

94.48

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MISIANSIGVIP+PAPSSAS AAR ACSMTVFS ADVKSS+SSSVCSLSS+VVNPFNCSIRRGRRLFSEVPVRSDSGTS SATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY+
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV36 FeThRed_A domain-containing protein

7.10e-115

100

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain

1.47e-107

92.82

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

A0A5D3D039 Sphingoid long-chain bases kinase 1

1.85e-98

92.82

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

8.11e-95

85.64

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCSI RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

6.65e-94

85.08

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Query:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+SSSV SLSS+VVNPFNCSI RGRR FSEV V+SDSGT SSA AVSAA TSLSE+ETDEA
Subjt:  MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        AAARIGARVRVKVPL VYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

SwissProt top hits

e value

%identity

Alignment

P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic

8.0e-17

37.71

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Query:  GVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGR-RLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGA
        GV    + ++AS A   A +         +++ S++VC  S+L       +  R R  +  EV ++SDS T       S++++   E+E  +    ++G 
Subjt:  GVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGR-RLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGA

Query:  RVRVKVPLKVYHVAKLPDANL-EGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        +V+VK PLKVYHV KLP+  L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK V HLKEEEFE +
Subjt:  RVRVKVPLKVYHVAKLPDANL-EGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

P80680 Ferredoxin-thioredoxin reductase, variable chain

1.0e-24

62.11

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Query:  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFVAHLKEEEFEYV
        A+  ++ EE   AAA +IG RVRV  PL+VYHV K PD +++GMEGVVK YV VWKGKRV+AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Subjt:  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFVAHLKEEEFEYV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

1.4e-29

49.35

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Query:  SMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDAN
        S ++F    + +S+  S C+ S    NP   +IR    + S   V +D+  SSS        TSL  EE DE A  +IGARVRV VPLKVYHV ++P+  
Subjt:  SMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDAN

Query:  LEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV
        L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Subjt:  LEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

1.6e-28

55.28

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Query:  SIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFV
        S R+  R      V   S  S +A A  +++ S SEEE +  A A+IG+RVRV  PLKVYHV ++P+ +LEGMEG +KDYV VWKGKR+SANLPYK+EF 
Subjt:  SIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFV

Query:  VPVEGRPPVKFVAHLKEEEFEYV
          +EGR  VKFV+HLKE+EFE++
Subjt:  VPVEGRPPVKFVAHLKEEEFEYV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATTAGTATTGCGAACAGTATCGGCGTGATACCATCACCGGCTCCGTCGTCGGCGTCGATGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTGCTGATGT
TAAATCTTCCTTTTCCTCATCCGTTTGTTCTCTATCGTCACTTGTTGTTAATCCTTTCAACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGAT
CAGATTCTGGAACTTCGTCTTCAGCTACTGCTGTTTCTGCGGCGACTACGTCATTGTCGGAGGAAGAGACTGATGAAGCGGCTGCCGCTAGGATTGGAGCTAGAGTTAGG
GTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCAAATCTTGAGGGAATGGAAGGAGTGGTGAAGGATTATGTACGTGTTTGGAAAGGGAAGCGTGT
TTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCTGTCAAATTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAA

mRNA sequence

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Protein sequence

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MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVR
VKVPLKVYHVAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

Cucsat.G10033 (gene) of Cucumber (B10) v3 genome