; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G101 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G101
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L19, chloroplastic
Genome locationctg1:1775360..1778214
RNA-Seq ExpressionCucsat.G101
SyntenyCucsat.G101
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147231.1 50S ribosomal protein L19-1, chloroplastic [Cucumis sativus]5.51e-7898.44Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        IRVVSHRKVRRARLYYLRDKLPKLSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

XP_008448785.1 PREDICTED: 50S ribosomal protein L19, chloroplastic [Cucumis melo]1.58e-7797.66Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        I+VVSHRKVRRARLYYLRDKLPKLSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

XP_023005538.1 50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima]5.59e-7390.62Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P   KP RKPRVKLGDVMGILNKRA+EASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+E
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        ++VVSHRKVRRARLYYLRDKLP+LSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

XP_023541012.1 50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo]3.94e-7391.41Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P   KP RKPRVKLGDVMGILNKRA+EASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+E
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        ++VVSHRKVRRARLYYLRDKLP+LSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

XP_038906353.1 50S ribosomal protein L19, chloroplastic [Benincasa hispida]6.40e-7796.88Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P+ EKP RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        I+VVSHRKVRRARLYYLRDKLPKLSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

TrEMBL top hitse value%identityAlignment
A0A0A0L237 Uncharacterized protein2.67e-7898.44Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        IRVVSHRKVRRARLYYLRDKLPKLSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

A0A1S3BJX1 50S ribosomal protein L19, chloroplastic7.64e-7897.66Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        I+VVSHRKVRRARLYYLRDKLPKLSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

A0A2P5CUJ4 Ribosomal protein3.95e-7291.94Show/hide
Query:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV
        KP RKPRVKLGD+MGILNKRA+EASEKERP+PDIRTGDIVE+KLEV ENRRRLSVY+GIVIS+QNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+EIRVV
Subjt:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV

Query:  SHRKVRRARLYYLRDKLPKLSTFK
        SHRKVRRARLYYLRDKLP+LSTFK
Subjt:  SHRKVRRARLYYLRDKLPKLSTFK

A0A6J1FK79 50S ribosomal protein L19-1, chloroplastic2.70e-7390.62Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P   KP RKPRVKLGDVMGILNKRA+EASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+E
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        ++VVSHRKVRRARLYYLRDKLP+LSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

A0A6J1L2G3 50S ribosomal protein L19-1, chloroplastic2.70e-7390.62Show/hide
Query:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE
        P   KP RKPRVKLGDVMGILNKRA+EASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+E
Subjt:  PRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIRE

Query:  IRVVSHRKVRRARLYYLRDKLPKLSTFK
        ++VVSHRKVRRARLYYLRDKLP+LSTFK
Subjt:  IRVVSHRKVRRARLYYLRDKLPKLSTFK

SwissProt top hitse value%identityAlignment
B2JA71 50S ribosomal protein L191.6e-1946.23Show/hide
Query:  RAIEASEKERPIPDIRTGDIVELKLEVQENRR-RLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLP
        R+IEA + +  +PDI  GD V++ ++++E  + R+  Y G+VI+K+N GI+ TI +R++  GVGVE VF L+SP I  I+V+   KVRRA+LYYLRD++ 
Subjt:  RAIEASEKERPIPDIRTGDIVELKLEVQENRR-RLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLP

Query:  KLSTFK
        K +  K
Subjt:  KLSTFK

B8HT34 50S ribosomal protein L191.5e-2047.17Show/hide
Query:  RAIEASEKERPIPDIRTGDIVELKLEVQE-NRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLP
        R++EA + +  +P+I  GD V++ + +QE N+ R   Y GIVI+K+N+GI+ TI +RRI  GVGVE VF L+SP +  I+++   KVRRA+LYYLRD++ 
Subjt:  RAIEASEKERPIPDIRTGDIVELKLEVQE-NRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLP

Query:  KLSTFK
        K +  K
Subjt:  KLSTFK

P82413 50S ribosomal protein L19, chloroplastic1.1e-5280.8Show/hide
Query:  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRV
        E+P R+ RVKLGD+MGILNK+A+ A+E+ RP+P IRTGDIV+++LEV EN+RRLSVY+GIVIS+QNAGIHTTIRIRRIIAGVGVEIVFPLYSPNI+EI+V
Subjt:  EKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRV

Query:  VSHRKVRRARLYYLRDKLPKLSTFK
        VSHRKVR+ARLYYLRDKLP+LSTFK
Subjt:  VSHRKVRRARLYYLRDKLPKLSTFK

Q8RXX5 50S ribosomal protein L19-2, chloroplastic7.2e-5279.84Show/hide
Query:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV
        KP  K RVKLGD+MG+LNK+AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEIVFP+YSPNI+EI+VV
Subjt:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV

Query:  SHRKVRRARLYYLRDKLPKLSTFK
        SHRKVRRARLYYLRDKLP+LSTFK
Subjt:  SHRKVRRARLYYLRDKLPKLSTFK

Q8W463 50S ribosomal protein L19-1, chloroplastic5.3e-5583.06Show/hide
Query:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV
        KP+RKPR+KLGDVMGILN++AIE +EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEIVFP+YSPNI+EI+VV
Subjt:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV

Query:  SHRKVRRARLYYLRDKLPKLSTFK
        SHRKVRRARLYYLRDKLP+LSTFK
Subjt:  SHRKVRRARLYYLRDKLPKLSTFK

Arabidopsis top hitse value%identityAlignment
AT1G24240.1 Ribosomal protein L19 family protein2.7e-3056.48Show/hide
Query:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY
        +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN+R I+VV  +KVRRA+LYY
Subjt:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY

Query:  LRDKLPKL
        LR+K+  L
Subjt:  LRDKLPKL

AT4G11630.1 Ribosomal protein L19 family protein1.1e-3158.33Show/hide
Query:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY
        +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN+REI+VV  +KVRRA+LYY
Subjt:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY

Query:  LRDKLPKL
        LRDK+  L
Subjt:  LRDKLPKL

AT4G17560.1 Ribosomal protein L19 family protein3.8e-5683.06Show/hide
Query:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV
        KP+RKPR+KLGDVMGILN++AIE +EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEIVFP+YSPNI+EI+VV
Subjt:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV

Query:  SHRKVRRARLYYLRDKLPKLSTFK
        SHRKVRRARLYYLRDKLP+LSTFK
Subjt:  SHRKVRRARLYYLRDKLPKLSTFK

AT5G11750.1 Ribosomal protein L19 family protein1.1e-3158.33Show/hide
Query:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY
        +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN+REI+VV  +KVRRA+LYY
Subjt:  VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYY

Query:  LRDKLPKL
        LRDK+  L
Subjt:  LRDKLPKL

AT5G47190.1 Ribosomal protein L19 family protein5.1e-5379.84Show/hide
Query:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV
        KP  K RVKLGD+MG+LNK+AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEIVFP+YSPNI+EI+VV
Subjt:  KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVV

Query:  SHRKVRRARLYYLRDKLPKLSTFK
        SHRKVRRARLYYLRDKLP+LSTFK
Subjt:  SHRKVRRARLYYLRDKLPKLSTFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGCCCGAGGAGGGAGAAGCCGTCAAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCATCAGAGAAGGAGAGGCC
GATTCCAGACATTAGAACTGGTGACATTGTAGAACTTAAACTGGAAGTTCAAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTCATATCAAAACAAAATGCTG
GCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTATACTCACCAAACATCAGAGAGATAAGAGTGGTGAGCCACAGG
AAGGTGAGGAGGGCAAGATTGTATTATTTAAGAGACAAACTTCCAAAACTCTCTACTTTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAGCCCGAGGAGGGAGAAGCCGTCAAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCATCAGAGAAGGAGAGGCC
GATTCCAGACATTAGAACTGGTGACATTGTAGAACTTAAACTGGAAGTTCAAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTCATATCAAAACAAAATGCTG
GCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTATACTCACCAAACATCAGAGAGATAAGAGTGGTGAGCCACAGG
AAGGTGAGGAGGGCAAGATTGTATTATTTAAGAGACAAACTTCCAAAACTCTCTACTTTCAAGTGA
Protein sequenceShow/hide protein sequence
MLSPRREKPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVSHR
KVRRARLYYLRDKLPKLSTFK