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Cucsat.G10117 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10117
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosomal protein L7/L12
Genome locationctg1673:5621390..5623419
RNA-Seq ExpressionCucsat.G10117
SyntenyCucsat.G10117
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER45545.1 ribosomal protein L7/L12 [Striga asiatica]1.14e-3768.28Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT
        MAILAPA+SSCFLASSASSF+T SLNFFG+PSI+S ASF A+LV ALT LI  ILALLGTSS+TTSNSVFSSTA+AA++   A   AA  A GAK AA+T
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT

Query:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGRR
        PSLS R ST   AS+RV   +S PS++ FSGA TAA  RR  GRR
Subjt:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGRR

KAG6399783.1 hypothetical protein SASPL_141268 [Salvia splendens]7.22e-1657.94Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT
        M I APASSSCF ASSASSF T SLNFFGNPSI+   SF A+LV ALT LI AIL LLGTSSITTS                          GAK AA+T
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT

Query:  PSLSCRK
        PSLS R+
Subjt:  PSLSCRK

KAG6402141.1 hypothetical protein SASPL_139016 [Salvia splendens]9.29e-1650Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT
        M I APASSSCF ASSASSF T SLNFFGNPSI+  ASF A+LV ALT LI AIL LLGTSSITTS                          G K AA+T
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT

Query:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRR-WVG
        PSLS   +T                   FSGA TAA G   W G
Subjt:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRR-WVG

KAG6436777.1 hypothetical protein SASPL_101679 [Salvia splendens]1.19e-1478.79Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTS
        M I APASSSCF ASSASSF T SLNFFGNPSI+  ASF A+LV ALT LI AIL LLGTSSITTS
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTS

RHN49770.1 hypothetical protein MtrunA17_Chr6g0450131 [Medicago truncatula]3.07e-2272.83Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAA
        M  LAPA+SSCFLASSASS  TPSLNFFG PSI+S ASF  KLV ALT LI AILALLGTSS+TTSNSVFSST +A+A+      GAAT AA
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAA

TrEMBL top hitse value%identityAlignment
A0A396H908 Uncharacterized protein1.49e-2272.83Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAA
        M  LAPA+SSCFLASSASS  TPSLNFFG PSI+S ASF  KLV ALT LI AILALLGTSS+TTSNSVFSST +A+A+      GAAT AA
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAA

A0A4D9AC27 Uncharacterized protein3.50e-1657.94Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT
        M I APASSSCF ASSASSF T SLNFFGNPSI+   SF A+LV ALT LI AIL LLGTSSITTS                          GAK AA+T
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT

Query:  PSLSCRK
        PSLS R+
Subjt:  PSLSCRK

A0A5A7QJL0 Ribosomal protein L7/L125.53e-3868.28Show/hide
Query:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT
        MAILAPA+SSCFLASSASSF+T SLNFFG+PSI+S ASF A+LV ALT LI  ILALLGTSS+TTSNSVFSSTA+AA++   A   AA  A GAK AA+T
Subjt:  MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADT

Query:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGRR
        PSLS R ST   AS+RV   +S PS++ FSGA TAA  RR  GRR
Subjt:  PSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGRR

A0A7C9D9F0 Uncharacterized protein (Fragment)7.47e-1066.1Show/hide
Query:  GAATTAAGAKAAADTPSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGR
        GAATTAAGAK AA+TP +S  +S R  ASSRVR+ +  PS SIFSGA TAA+GR WV R
Subjt:  GAATTAAGAKAAADTPSLSCRKSTRSRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGR

D7LDD4 Predicted protein6.48e-1270.77Show/hide
Query:  PASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVF
        PASS  FLA SASS  TPSLNF GNPSISS ASF AK+V ALT LITAI  LLGTS IT+++  F
Subjt:  PASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTTTAGCTCCAGCTTCTTCAAGCTGTTTCTTAGCATCGTCAGCTTCTTCTTTTGAAACCCCTTCTTTAAACTTCTTTGGCAACCCTTCAATAAGTTCTTTAGC
TTCCTTCAAAGCCAAGCTTGTCATTGCTCTCACTGACTTAATCACAGCAATCCTTGCATTACTAGGCACATCCTCAATCACCACATCGAATTCCGTCTTCTCCTCTACTG
CCTCCGCTGCCGCCTCCCCCCCAACAGCGCCTCCAGGTGCTGCCACCACAGCAGCCGGGGCGAAGGCCGCGGCAGACACGCCAAGCTTGTCTTGCAGGAAGTCAACCAGA
AGCCGAGCCTCTTCGAGGGTGAGGCTGGAGATGTCGGAGCCGAGTTTTTCGATTTTCTCCGGGGCGGAGACGGCGGCAATGGGACGGAGGTGGGTGGGGCGGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTTTAGCTCCAGCTTCTTCAAGCTGTTTCTTAGCATCGTCAGCTTCTTCTTTTGAAACCCCTTCTTTAAACTTCTTTGGCAACCCTTCAATAAGTTCTTTAGC
TTCCTTCAAAGCCAAGCTTGTCATTGCTCTCACTGACTTAATCACAGCAATCCTTGCATTACTAGGCACATCCTCAATCACCACATCGAATTCCGTCTTCTCCTCTACTG
CCTCCGCTGCCGCCTCCCCCCCAACAGCGCCTCCAGGTGCTGCCACCACAGCAGCCGGGGCGAAGGCCGCGGCAGACACGCCAAGCTTGTCTTGCAGGAAGTCAACCAGA
AGCCGAGCCTCTTCGAGGGTGAGGCTGGAGATGTCGGAGCCGAGTTTTTCGATTTTCTCCGGGGCGGAGACGGCGGCAATGGGACGGAGGTGGGTGGGGCGGCGATAG
Protein sequenceShow/hide protein sequence
MAILAPASSSCFLASSASSFETPSLNFFGNPSISSLASFKAKLVIALTDLITAILALLGTSSITTSNSVFSSTASAAASPPTAPPGAATTAAGAKAAADTPSLSCRKSTR
SRASSRVRLEMSEPSFSIFSGAETAAMGRRWVGRR