CuGenDBv2

Gene ID	Cucsat.G10130
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	tRNA pseudouridine synthase B
Genome location	ctg1673:5862309..5866782
RNA-Seq Expression	Cucsat.G10130
Synteny	Cucsat.G10130
Gene Ontology terms	GO:0001522 - pseudouridine synthesis (biological process) GO:0006396 - RNA processing (biological process) GO:0006400 - tRNA modification (biological process) GO:1990481 - mRNA pseudouridine synthesis (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function) GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domains	IPR002501 - Pseudouridine synthase II, N-terminal IPR014780 - tRNA pseudouridine synthase II, TruB IPR020103 - Pseudouridine synthase, catalytic domain superfamily IPR032819 - tRNA pseudouridylate synthase B, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037597.1 TruB_N domain-containing protein [Cucumis melo var. makuwa]

0.0

94.85

Show/hide

Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE
        MAKSPALFHASHFFIRSTLMPSSKSL LFLPLSNLNH HRFAFRNSLSPLSLR F T+T FPLQYELIINRPSYPSPPHQNPRTPAR+SSDN PELNSSE
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE

Query:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
        DP+SELGFDSWVDRKLISE GTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQ EGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
Subjt:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM

Query:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS
        LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGV+KA RVKPE NVEVANGMDDK MVFFDEGKPEKENKGSV DV+EKKVEEFFKCLKKGPAKDS
Subjt:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS

Query:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS
         IGQ EPYLLTRHMELPA+WDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEATS
Subjt:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS

Query:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
        TWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
Subjt:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC

Query:  ADLGKTLGSCAHLTALRRDSIGQY
        ADLGK LGSCAHLTALRRDSIGQ+
Subjt:  ADLGKTLGSCAHLTALRRDSIGQY

XP_008458830.1 PREDICTED: uncharacterized protein LOC103498118 [Cucumis melo]

0.0

95.04

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Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE
        MAKSPALFHASHFFIRSTLMPSSKSL LFLPLSNLNH HRFAFRNSLSPLSLR F T+T FPLQYELIINRPSYPSPPHQNPRTPAR+SSDN PELNSSE
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE

Query:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
        DP+SELGFDSWVDRKLISE GTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQ EGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
Subjt:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM

Query:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS
        LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGV+KA RVKPE NVEVANGMDDK MVFFDEGKPEKENKGSV DV+EKKVEEFFKCLKKGPAKDS
Subjt:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS

Query:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS
         IGQ EPYLLTRHMELPA+WDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEATS
Subjt:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS

Query:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
        TWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
Subjt:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC

Query:  ADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        ADLGK LGSCAHLTALRRDSIGQ+LADDAWEFKELEDAITKGYF
Subjt:  ADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_011655389.2 uncharacterized protein LOC101215528 isoform X1 [Cucumis sativus]

0.0

100

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Query:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
        MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
Subjt:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP

Query:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
        ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
Subjt:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH

Query:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
        DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
Subjt:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV

Query:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM
        EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM
Subjt:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM

Query:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
        IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
Subjt:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI

Query:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_031741429.1 uncharacterized protein LOC101215528 isoform X2 [Cucumis sativus]

0.0

90.34

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Query:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
        MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
Subjt:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP

Query:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
        ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
Subjt:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH

Query:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
        DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
Subjt:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV

Query:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM
        EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKV                               
Subjt:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM

Query:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
                               IQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
Subjt:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI

Query:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_038891059.1 uncharacterized protein LOC120080471 [Benincasa hispida]

0.0

89.36

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Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS
        M KS ALFHAS+FFIRST MPSS +L+LFL  SNLNHLHRFAFRNSLSPLS R  STT T FPLQYE+IINRPSYP PPHQN RTP R+ SDNSPE +SS
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS

Query:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK
        EDPTSE+GF+SWVDRKLISE  T+SGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQ EGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK

Query:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GV+K   V+PEM V+V +GMDDK +VFFDEGKPE ENKGSV DV+EKKVEEFFKCLKK PAKD
Subjt:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD

Query:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S IG  EPYLLTRH ELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLV+RYQGMIKSYSGVFRLGEAT
Subjt:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKD DI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KP03 Uncharacterized protein

0.0

100

Show/hide

Query:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
        MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP
Subjt:  MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTP

Query:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
        ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH
Subjt:  ARVSSDNSPELNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFH

Query:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
        DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV
Subjt:  DAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKV

Query:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM
        EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM
Subjt:  EEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGM

Query:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
        IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI
Subjt:  IKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLI

Query:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  FRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A1S3C8B0 uncharacterized protein LOC103498118

0.0

95.04

Show/hide

Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE
        MAKSPALFHASHFFIRSTLMPSSKSL LFLPLSNLNH HRFAFRNSLSPLSLR F T+T FPLQYELIINRPSYPSPPHQNPRTPAR+SSDN PELNSSE
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE

Query:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
        DP+SELGFDSWVDRKLISE GTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQ EGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
Subjt:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM

Query:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS
        LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGV+KA RVKPE NVEVANGMDDK MVFFDEGKPEKENKGSV DV+EKKVEEFFKCLKKGPAKDS
Subjt:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS

Query:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS
         IGQ EPYLLTRHMELPA+WDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEATS
Subjt:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS

Query:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
        TWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
Subjt:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC

Query:  ADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        ADLGK LGSCAHLTALRRDSIGQ+LADDAWEFKELEDAITKGYF
Subjt:  ADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A5A7T7S0 TruB_N domain-containing protein

0.0

94.85

Show/hide

Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE
        MAKSPALFHASHFFIRSTLMPSSKSL LFLPLSNLNH HRFAFRNSLSPLSLR F T+T FPLQYELIINRPSYPSPPHQNPRTPAR+SSDN PELNSSE
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSE

Query:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
        DP+SELGFDSWVDRKLISE GTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQ EGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM
Subjt:  DPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKM

Query:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS
        LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGV+KA RVKPE NVEVANGMDDK MVFFDEGKPEKENKGSV DV+EKKVEEFFKCLKKGPAKDS
Subjt:  LYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDS

Query:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS
         IGQ EPYLLTRHMELPA+WDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEATS
Subjt:  NIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS

Query:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
        TWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
Subjt:  TWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC

Query:  ADLGKTLGSCAHLTALRRDSIGQY
        ADLGK LGSCAHLTALRRDSIGQ+
Subjt:  ADLGKTLGSCAHLTALRRDSIGQY

A0A6J1FDZ7 uncharacterized protein LOC111444875

0.0

86.79

Show/hide

Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS
        MA SPAL HASHFFIRSTLM SSKSL+ F PLSNLNHLHRF   NSLS LSLR  STT T FPLQY++II+RP YP  P QN RTPAR+S DNSPEL SS
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS

Query:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK
        EDP SELGF+SWVD+KLISE  + SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ +TQ EGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK

Query:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVRKA  VKPE  VEV NG+D+K +VFFD G+PEK+NKGSV DV+EKKVEEFFKCLKK PAKD
Subjt:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD

Query:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S IGQ  PYLLTRH ELPAKWDSPCGTVVL+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDI+KA ASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A6J1JSH8 uncharacterized protein LOC111489372

0.0

87.16

Show/hide

Query:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS
        MA SPAL HASHFFIRSTLM SSKSL+ F PLSNLNHLHRF   NSLS LSLR  STT T FPLQY++IIN P YP  P QN RTP R+SSDNSPEL SS
Subjt:  MAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTT-TLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSS

Query:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK
        EDP SELGF+SWVD+KLISE  + SGKEGVVMDKA RKYYNKRR+RMYGSDSDED +TQ EGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYK

Query:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVRKA  VKPE  VEV NG+D+K +VFFD G+PEK+NKGSV DV+EKKVEEFFKCLKK PAKD
Subjt:  MLYQLEKKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKD

Query:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S IGQ EPYLLTRH ELPAKWDSPCGTVVL+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

SwissProt top hits

e value

%identity

Alignment

A0JUU8 tRNA pseudouridine synthase B

7.1e-48

44.24

Show/hide

Query:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        +V+++KP+GWTS  V G++RRL   +KVGHAGTLDPMATG+L++ + KAT+L+    G  K+Y+   RLGE+T T DA+  V+       + +  I+ A 
Subjt:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG
        A+  GEI QVP   SAIKV GER Y + R GE ++L+ R ++I +FD+     +R   +      V CS GTYIR+L  DLG+ LG+  HLTALRR  +G
Subjt:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG

Query:  QYLADDAWEFKELEDAI
         Y  D A   ++L + +
Subjt:  QYLADDAWEFKELEDAI

A1R520 tRNA pseudouridine synthase B

4.6e-47

45.62

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Query:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        +V+++KP+GWTS  V G++RRL   +KVGHAGTLDPMATG+L++ + KAT+L+    G  K+Y+   RLGE T T DA+  V +     HI DD +    
Subjt:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIE--RSLDDRQNLIFRVT--CSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG
        A+  G I QVP   SAIKV GER Y + R GE ++L+ R ++I +FD+     +D  + +   VT  CS GTYIR+L  DLG  LG   HLTALRR  +G
Subjt:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIE--RSLDDRQNLIFRVT--CSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG

Query:  QYLADDAWEFKELEDAI
         Y  D A   +EL + +
Subjt:  QYLADDAWEFKELEDAI

A3PY88 tRNA pseudouridine synthase B

2.3e-46

45.58

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Query:  GTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQK
        G +V+++KP G TS  V G+ RR+   +KVGHAGTLDPMATG+L+V + +ATKL+       KSY    RLG+ T+T DA+  V++  P   I D+ I  
Subjt:  GTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQK

Query:  AAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG
        A A+  GEI QVP   SAIKVGG+R Y+ AR G+++EL+ R++ I +F++   R +D   ++   V CS GTYIR+L  D+G TLG   HLT LRR  +G
Subjt:  AAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIG

Query:  QYLADDAWEFKELED
        ++  D+A+    L D
Subjt:  QYLADDAWEFKELED

Q47RU8 tRNA pseudouridine synthase B

1.6e-47

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Query:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        VV+++KP GWTS  V  ++RRL   ++VGHAGTLDPMATG+L+V VGKAT+L+       K Y    RLG++T+T DA+  +++R P +HI +  +    
Subjt:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIE--RSLDDRQNLIF----RVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDS
         +  G I QVPP  SA+KV G+R Y +AR GE++EL  R++++ +F +   R +D           RVTCS GTYIRSL  DLG  LG   HLTALRR  
Subjt:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIE--RSLDDRQNLIF----RVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDS

Query:  IGQYLADDAWEFKELEDAIT
        +G Y  + A    EL    T
Subjt:  IGQYLADDAWEFKELEDAIT

Q9RB36 tRNA pseudouridine synthase B

1.9e-48

45.95

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Query:  GTVVLLNKPKGWTSFTVCGKLRRLV-------KVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHI
        G V+L++KP  W+SF    KL+ L+       K  K+GHAGTLDP+ATGLL++C GK TK +   QG  K Y+G F +G  T ++D ++ + Q  P EHI
Subjt:  GTVVLLNKPKGWTSFTVCGKLRRLV-------KVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHI

Query:  KDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALR
         +  I +    F GEI Q PP+FSAIK  G R+YE AR GESIE+  R+ +I +F+I R       + FRV CSKGTYIRSL  D GK + S +HLT LR
Subjt:  KDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALR

Query:  RDSIGQYLADDAWEFKELEDAI
        R  IG Y   +A +    E+++
Subjt:  RDSIGQYLADDAWEFKELEDAI

Arabidopsis top hits

e value

%identity

Alignment

AT3G57150.1 homologue of NAP57

3.1e-22

34.9

Show/hide

Query:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA
        V+ L+KP   +S  V   ++R+++V+K GH+GTLDP  TG LIVC+ +AT+LV   QG  K Y  V RL  A        P + +          + +A 
Subjt:  VVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKAA

Query:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALRR
         S  G ++Q PP+ SA+K        +  R  +I  S     + ++D +R L     ++F V+C  GTYIR++C  LG  LG   H+  LRR
Subjt:  ASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALRR

AT5G14460.1 Pseudouridine synthase family protein

4.1e-184

65.02

Show/hide

Query:  LMPSSKSLSLFLPL--SNLNHLHRFAFRNSLSP--LSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSEDPTSELGFDSWVDR
        LM SS  +S+  PL  S++       +RN   P   SL   +T+T +PLQY++IINRP+  S   QN R P +     +P+       ++E  FDSWVD 
Subjt:  LMPSSKSLSLFLPL--SNLNHLHRFAFRNSLSP--LSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPELNSSEDPTSELGFDSWVDR

Query:  KLISEGGTVSGKEG---VVMDKAMRKYYNKRRKRMYGSDSDEDN--RTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKMLYQLEKKYF
        KL  E     G+ G     MDKA RKYY+KRRKR+YGSDS+++N  R   EGFVELKPEVVEF+ LH+REEEL+F+D FAYPWEKDKHYKM+YQLEKKY+
Subjt:  KLISEGGTVSGKEG---VVMDKAMRKYYNKRRKRMYGSDSDEDN--RTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKMLYQLEKKYF

Query:  PDDGLDKAFLGPGE--SNVEVNEQTKGRQGVRKA--GRVKPEMNVEVAN-GMDDKRMVFFDEGKPEKENKGS---VVDVSEKKVEEFFKCLKKGPAKD--
        PD  LDKAFL PGE     + + + +G++ V  A  G+      + + N   DD ++VFFDE K ++E K S   VV V+EKKVE+FFK L K P +   
Subjt:  PDDGLDKAFLGPGE--SNVEVNEQTKGRQGVRKA--GRVKPEMNVEVAN-GMDDKRMVFFDEGKPEKENKGS---VVDVSEKKVEEFFKCLKKGPAKD--

Query:  -SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEA
         S  G GEP+L+TR+ ELP +WD P GTV+L+NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATK+VDRYQGMIK YSGVFRLGEA
Subjt:  -SNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEA

Query:  TSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRS
        TST DADSPVIQRE WEHIKDDDI+KA  SF GEIWQVPPMFSAIKVGGE+MYEKARRGE++ELSPR+ISIF+FDIERSLDDRQNLIFRV CSKGTYIRS
Subjt:  TSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRS

Query:  LCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        LCADL K LGSCAHLTALRRDSIG+Y A+DAWEF ELE AITK YF
Subjt:  LCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATATAAACATCTTGCTGCTCATCCATACAACTTCACTTCCAATGGCGAAATCACCTGCTCTGTTCCACGCTTCCCATTTCTTCATCCGCTCTACACTCATGCCTTC
TTCCAAATCACTCTCTCTCTTCCTTCCACTCTCAAATCTCAACCATCTTCACAGGTTTGCCTTTCGTAATTCACTCTCTCCCCTATCCCTCCGCACATTCTCCACCACCA
CTCTATTCCCTCTCCAATACGAATTGATTATCAACCGACCGTCTTATCCTTCTCCGCCCCATCAGAATCCACGAACACCCGCCAGAGTCAGCTCCGACAACTCTCCCGAG
CTCAACTCCTCCGAGGACCCCACTTCCGAATTGGGGTTCGACAGCTGGGTCGATCGGAAGCTTATATCCGAGGGTGGGACTGTTTCTGGTAAGGAAGGTGTAGTCATGGA
TAAGGCTATGAGAAAATACTATAATAAAAGAAGGAAGAGGATGTATGGGTCGGATTCTGATGAAGATAATAGGACGCAGGCTGAGGGATTTGTGGAATTAAAGCCTGAGG
TGGTTGAATTTAACACATTGCATAAGAGAGAGGAGGAGTTGTTCTTTCATGACGCTTTTGCGTATCCATGGGAGAAAGATAAGCATTACAAAATGTTGTATCAATTGGAG
AAGAAGTATTTTCCTGATGACGGTCTTGACAAAGCTTTTCTGGGACCTGGAGAGTCAAATGTGGAAGTGAATGAACAGACAAAGGGAAGGCAGGGGGTGAGAAAGGCAGG
GAGGGTAAAGCCTGAGATGAATGTGGAGGTCGCCAATGGTATGGATGACAAACGGATGGTTTTCTTTGATGAGGGGAAACCAGAAAAGGAGAATAAAGGGTCTGTAGTAG
ATGTATCAGAGAAGAAGGTGGAGGAGTTCTTCAAGTGTTTGAAGAAAGGTCCTGCTAAAGATTCTAACATTGGTCAGGGGGAGCCATATCTTTTGACGAGGCATATGGAG
CTCCCGGCTAAATGGGATAGTCCTTGTGGGACAGTCGTTTTGCTGAACAAACCTAAAGGGTGGACTTCATTTACGGTATGTGGAAAACTTCGGCGCCTAGTCAAAGTGAA
AAAGGTAGGTCATGCAGGTACTCTTGATCCTATGGCTACTGGTTTGTTGATAGTGTGTGTTGGTAAGGCAACGAAGTTGGTTGACAGATATCAAGGCATGATTAAGAGCT
ACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGATTCACCCGTAATTCAGCGAGAGCCTTGGGAGCACATCAAAGATGATGACATACAAAAAGCT
GCTGCCTCTTTTTGTGGGGAAATTTGGCAAGTTCCTCCCATGTTTTCTGCCATTAAAGTTGGAGGTGAAAGGATGTATGAGAAAGCAAGAAGGGGAGAAAGTATTGAGCT
TTCCCCTAGACAGATATCAATTTTCAAATTTGATATTGAGCGTAGTTTAGATGACAGGCAAAATTTGATTTTTCGAGTTACATGTTCTAAAGGAACATACATTCGGTCAC
TTTGTGCAGATCTTGGGAAGACTCTTGGCAGTTGTGCTCATCTAACTGCTCTTCGAAGGGATTCAATAGGGCAATATCTAGCAGATGATGCCTGGGAATTCAAAGAGTTG
GAAGATGCTATTACCAAAGGTTATTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYINILLLIHTTSLPMAKSPALFHASHFFIRSTLMPSSKSLSLFLPLSNLNHLHRFAFRNSLSPLSLRTFSTTTLFPLQYELIINRPSYPSPPHQNPRTPARVSSDNSPE
LNSSEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQAEGFVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKMLYQLE
KKYFPDDGLDKAFLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEKENKGSVVDVSEKKVEEFFKCLKKGPAKDSNIGQGEPYLLTRHME
LPAKWDSPCGTVVLLNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIQKA
AASFCGEIWQVPPMFSAIKVGGERMYEKARRGESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTALRRDSIGQYLADDAWEFKEL
EDAITKGYF

Cucsat.G10130 (gene) of Cucumber (B10) v3 genome