; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1016 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1016
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationctg1:6735346..6738963
RNA-Seq ExpressionCucsat.G1016
SyntenyCucsat.G1016
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0009767 - photosynthetic electron transport chain (biological process)
GO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650222.1 hypothetical protein Csa_011015 [Cucumis sativus]2.87e-167100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_004133800.1 serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus]7.71e-177100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_022147391.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia]2.35e-16495.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDS-PYRRSPSPVF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDS-PYRRSPSPVF

Query:  RRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFR
Subjt:  RRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_022924566.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita moschata]1.75e-15792.89Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFE+ERDAED+IR LDN+PFGYDRRRLSVEWARGERGR RDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRA  YGR GDSPYRRSPSPV+ 
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSP+YG
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG

XP_038893478.1 serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]9.66e-17198.36Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAG YGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG-RFR
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGG RFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG-RFR

TrEMBL top hitse value%identityAlignment
A0A0A0L8H4 Uncharacterized protein3.74e-177100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A1S3AUZ7 serine/arginine-rich splicing factor RS31-like isoform X13.74e-177100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X23.74e-177100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A6J1D279 serine/arginine-rich splicing factor RS31-like isoform X11.14e-16495.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDS-PYRRSPSPVF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDS-PYRRSPSPVF

Query:  RRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFR
Subjt:  RRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A6J1ECU9 serine/arginine-rich splicing factor RS31-like isoform X18.46e-15892.89Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFE+ERDAED+IR LDN+PFGYDRRRLSVEWARGERGR RDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRA  YGR GDSPYRRSPSPV+ 
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSP+YG
Subjt:  RRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS315.2e-9474.18Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRSPEYG
           RRPSPDYGRA SP YDRY GP  YERRRSPDYGR RS +YG
Subjt:  VFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRSPEYG

P92965 Serine/arginine-rich splicing factor RS403.1e-7058.73Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+    SP R     R   SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP--YRRS

Query:  PSPVFRRRPSPDYGRAHSP--AYDRYNGPYERRRSPDYGRNRSPEYGGRFRR
        PSP  R R SPDYGR  SP  AY +       R SPDYGR RSP    + RR
Subjt:  PSPVFRRRPSPDYGRAHSP--AYDRYNGPYERRRSPDYGRNRSPEYGGRFRR

P92966 Serine/arginine-rich splicing factor RS411.4e-7058.23Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
          R R SPDYGR  SP   +       R SPDYGR R
Subjt:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Q9NEW6 Probable splicing factor, arginine/serine-rich 32.5e-1631.66Show/hide
Query:  IFVGNFGYDTRQSELERLFSKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARG------------ERGRH--------
        ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   + +D RR+ VE+ RG            + G H        
Subjt:  IFVGNFGYDTRQSELERLFSKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARG------------ERGRH--------

Query:  RDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP
        R G +    QR T    ++   P     +D++ H    G V    + R+    V+F   ED   A+     +K         Y  +R+D   G       
Subjt:  RDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP

Query:  RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSP
          +GG GR       RS SP   RR SP Y    S +  R      R RS     +RSP
Subjt:  RRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A9.2e-9172.13Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV
        MR ++VGNF YDTR S+LERLFSK+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRSPEYG
        V+RRRPSPDY R  SP YDRY G  PYERR+SPDYGR RS +YG
Subjt:  VFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRSPEYG

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-9272.13Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV
        MR ++VGNF YDTR S+LERLFSK+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRSPEYG
        V+RRRPSPDY R  SP YDRY G  PYERR+SPDYGR RS +YG
Subjt:  VFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPDYGRNRSPEYG

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-7570.09Show/hide
Query:  IDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RR
Subjt:  IDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERR
        NFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERR

Query:  RSPDYGRNRSPEYG
        +SPDYGR RS +YG
Subjt:  RSPDYGRNRSPEYG

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-9574.18Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRSPEYG
           RRPSPDYGRA SP YDRY GP  YERRRSPDYGR RS +YG
Subjt:  VFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPDYGRNRSPEYG

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-7258.23Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
          R R SPDYGR  SP   +       R SPDYGR R
Subjt:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-7258.23Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
          R R SPDYGR  SP   +       R SPDYGR R
Subjt:  VFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGCTTATTCTCTAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTT
TGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGGCGCAGATTGTCTGTGGAATGGGCCAGGG
GTGAACGAGGTCGTCATCGCGATGGGTCCAAGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATAAATTTCGACCCCATACGTACAAGAGTACGTGATATT
GAAAGACACTTCGAACCTTATGGGAAAGTTCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCACAAAAGCCCTTGAGTGTAC
CCACATGAGCAAGATACTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGATGATGGTGAGAGGGGTGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTGGTTATG
GGCGACCAGGGGATAGTCCCTACCGGAGGTCTCCAAGTCCGGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCTTATGACAGATATAATGGA
CCTTATGAACGACGTAGGAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATACGGTGGTAGATTTCGCAGGTATTTATTGTTCTTTGATAGTTTGCACAGCCTGCCTTT
TGAGTTACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGCTTATTCTCTAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTT
TGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGGCGCAGATTGTCTGTGGAATGGGCCAGGG
GTGAACGAGGTCGTCATCGCGATGGGTCCAAGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATAAATTTCGACCCCATACGTACAAGAGTACGTGATATT
GAAAGACACTTCGAACCTTATGGGAAAGTTCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCACAAAAGCCCTTGAGTGTAC
CCACATGAGCAAGATACTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGATGATGGTGAGAGGGGTGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTGGTTATG
GGCGACCAGGGGATAGTCCCTACCGGAGGTCTCCAAGTCCGGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCTTATGACAGATATAATGGA
CCTTATGAACGACGTAGGAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATACGGTGGTAGATTTCGCAGGTATTTATTGTTCTTTGATAGTTTGCACAGCCTGCCTTT
TGAGTTACCATAG
Protein sequenceShow/hide protein sequence
MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDI
ERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG
PYERRRSPDYGRNRSPEYGGRFRRYLLFFDSLHSLPFELP