; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10183 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10183
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg1673:7028610..7030513
RNA-Seq ExpressionCucsat.G10183
SyntenyCucsat.G10183
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0016410 - N-acyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96496.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]9.70e-17798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]2.12e-180100Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]3.38e-17798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]1.13e-17597.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]1.96e-17697.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYLDGS+PGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic1.03e-180100Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic1.64e-17798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic1.64e-17798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A5D3BC57 Chlorophyll a-b binding protein, chloroplastic4.69e-17798.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic5.48e-17697.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic1.8e-12085.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGI     PS LSS+KSKFA  +P+   A N  SRFSMSA+WMPGQPRP YLDGSAPGDFGFD LGLGEVP NLER+KESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGI+VPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP K +E KVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        LLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+IIP+ I P
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic2.9e-11885.54Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic3.5e-3941.81Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP GLG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   V G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic4.3e-10675.72Show/hide
Query:  ASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVP
        +S+ L SC  +    PS+L+ S      G+P    A   S R +MSAEW PGQPRP +LDGS+PGDFGFDPLGL  VPEN ERFKESE+ HCRWAML VP
Subjt:  ASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVP

Query:  GILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL
        G+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SKDP K +E K+KEIKNGRLA+
Subjt:  GILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL

Query:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTI
        LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPR I
Subjt:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTI

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.2e-3840.68Show/hide
Query:  LSSSKSKFAVGVPISGVAVNASSRFSMSA---EWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVK
        L  S  K   GV    V  + S+ F + A   EW+PG   P YL GS PGD GFDPLGL E PENL  F ++EL++ RWAML V G+L+PE       + 
Subjt:  LSSSKSKFAVGVPISGVAVNASSRFSMSA---EWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVK

Query:  AQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQR--------SMEKDPEKKK---------YPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
          +W A         G+   + +  T+ VIEF+   +VE +R        S+ +DP  K+         YPGG F+PL ++       E K KEI NGRL
Subjt:  AQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQR--------SMEKDPEKKK---------YPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI
        A+LAF+GF +Q +   G GP +NL  H++DPWHN I
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI

Arabidopsis top hitse value%identityAlignment
AT3G54890.1 photosystem I light harvesting complex gene 12.0e-11985.54Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.2 photosystem I light harvesting complex gene 11.1e-9372.31Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.3 photosystem I light harvesting complex gene 19.3e-6479.47Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLA
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 12.3e-9182.41Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNG+
Subjt:  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR

AT5G01530.1 light harvesting complex photosystem II2.5e-4041.81Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP GLG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   V G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCTGTCGGTGTCCCCATTTCCGGTGTCGC
TGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTG
GGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTTAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGA
TTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGA
GTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGATTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCGTTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATTCCCAGAACAATTTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCTGTCGGTGTCCCCATTTCCGGTGTCGC
TGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTG
GGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTTAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGA
TTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGA
GTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGATTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCGTTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATTCCCAGAACAATTTCGCCTTGA
Protein sequenceShow/hide protein sequence
MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALG
LGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL
ENLATHLADPWHNNIGDIIIPRTISP