; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10185 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10185
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRNase H domain-containing protein
Genome locationctg1673:7054125..7064711
RNA-Seq ExpressionCucsat.G10185
SyntenyCucsat.G10185
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143798.1 uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus]2.09e-250100Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
        GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Subjt:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH

Query:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
Subjt:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

XP_008465682.1 PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo]2.83e-22891.76Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

XP_008465683.1 PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo]1.62e-22891.76Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

XP_008465684.1 PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo]3.44e-22991.78Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRV
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRV
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRV

XP_011655308.1 uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus]1.19e-250100Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
        GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Subjt:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH

Query:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
Subjt:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ9 RNase H domain-containing protein1.01e-250100Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
        GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH
Subjt:  GSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIH

Query:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
Subjt:  VQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

A0A1S3CPG2 uncharacterized protein LOC103503315 isoform X31.67e-22991.78Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRV
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRV
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRV

A0A1S3CPT7 uncharacterized protein LOC103503315 isoform X11.37e-22891.76Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

A0A1S3CQX0 uncharacterized protein LOC103503315 isoform X27.87e-22991.76Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

A0A5A7TCE2 RNase H family protein, putative isoform 21.37e-22891.76Show/hide
Query:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGD

Query:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENV

Query:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSTVLTPTL-----KDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

SwissProt top hitse value%identityAlignment
P54162 14.7 kDa ribonuclease H-like protein8.1e-0429.25Show/hide
Query:  DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLS
        DGAS GNPG +G G  ++ H+G         +G+ TN  AE+ A++ G+K    +G+  +  + DS +V  +   L   K+        E+ +LK  F  
Subjt:  DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLS

Query:  FEVNHV
        F +  +
Subjt:  FEVNHV

P64956 Uncharacterized protein Mb2253c2.7e-1540.48Show/hide
Query:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN
        +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK KH ++ +L  +   L +
Subjt:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN

Query:  KFLSFEVNHVLRVSTINSSLFASLTM
        +F       V R     +   A+  M
Subjt:  KFLSFEVNHVLRVSTINSSLFASLTM

P9WLH4 Uncharacterized protein MT22872.7e-1540.48Show/hide
Query:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN
        +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK KH ++ +L  +   L +
Subjt:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN

Query:  KFLSFEVNHVLRVSTINSSLFASLTM
        +F       V R     +   A+  M
Subjt:  KFLSFEVNHVLRVSTINSSLFASLTM

P9WLH5 Bifunctional protein Rv2228c2.7e-1540.48Show/hide
Query:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN
        +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK KH ++ +L  +   L +
Subjt:  LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKN

Query:  KFLSFEVNHVLRVSTINSSLFASLTM
        +F       V R     +   A+  M
Subjt:  KFLSFEVNHVLRVSTINSSLFASLTM

Q9HSF6 Ribonuclease HI5.6e-1335.83Show/hide
Query:  FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFL
        FDGAS+GNPG A  G VL + DG ++    + +G ATNN AEY A++  L++A   GF  I ++GDS+LV  Q+ G W     ++        +L   F 
Subjt:  FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFL

Query:  SFEVNHVLRVSTINSSLFAS
         + + HV R +   +   A+
Subjt:  SFEVNHVLRVSTINSSLFAS

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein9.0e-7544.72Show/hide
Query:  MNCFSQVSTYTRV-IFRRTNLVFAASTSIHGCSNAYWTSSFHNV----AVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFV
        MNC S   +Y  + + +R++ V          S+  W   F  +     +K  A+ S+     +  YS+R      K  S +        V+ E   FFV
Subjt:  MNCFSQVSTYTRV-IFRRTNLVFAASTSIHGCSNAYWTSSFHNV----AVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFV

Query:  VRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSL--------APCTFHGGDTSLTGETSGQDAI
        VRKGDV+G+YK  SDCQAQ+GSS+ DLPVSV+KG+SLPKDTEEYL+SVGLK  LY+++A+D++ D+FG+L        APCT    +   T ET  +D  
Subjt:  VRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSL--------APCTFHGGDTSLTGETSGQDAI

Query:  KKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLG
        K +   A +              DP  K  K+E      S   + E+CF+EFDGASKGNPG +GA AVL+  DGS+ICR+R+GLGIATNN AEY A++LG
Subjt:  KKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLG

Query:  LKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        LK A++KG+  I V+GDSKLVCMQ++G WK  HE +++L  E   L NK +SFE++HVLR
Subjt:  LKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.0e-6747.78Show/hide
Query:  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQD
        +E E   F++VRKGD++GVY+S S+CQ Q GSS+    +SV+KG+  PK  E+ L+S G+KNAL+++ A+ ++ D FG L PC      +S  GE+  + 
Subjt:  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQD

Query:  AIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNN
        +  KR       +++GS         P +K +K+E+ ++    SS          +SC +EFDGASKGNPG+AGAGAVLRA D SV+  LREG+G ATNN
Subjt:  AIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNN

Query:  VAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        VAEYRA+LLGL+SAL KGF  +HV GDS LVCMQVQG WK  H  M+ELC +  +L N F +F++ H+ R
Subjt:  VAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.0e-6747.78Show/hide
Query:  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQD
        +E E   F++VRKGD++GVY+S S+CQ Q GSS+    +SV+KG+  PK  E+ L+S G+KNAL+++ A+ ++ D FG L PC      +S  GE+  + 
Subjt:  VESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQD

Query:  AIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNN
        +  KR       +++GS         P +K +K+E+ ++    SS          +SC +EFDGASKGNPG+AGAGAVLRA D SV+  LREG+G ATNN
Subjt:  AIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSS--------NRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNN

Query:  VAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
        VAEYRA+LLGL+SAL KGF  +HV GDS LVCMQVQG WK  H  M+ELC +  +L N F +F++ H+ R
Subjt:  VAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

AT5G51080.1 RNase H family protein4.8e-6842.53Show/hide
Query:  MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKG
        MN FS+  +Y + V+FR+++ V          S+  W   F+  ++K++   +  S   + CYS+R      K +  S  +      + E   FFVVRKG
Subjt:  MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKG

Query:  DVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPEN
        D+VG+YK   DCQAQ+GSS+ D PVSV+KG+SL KDTEE L++VGLK  LY  +A D++ D+FG+L PC F             QD +            
Subjt:  DVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPEN

Query:  VGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI
               P+      K  +LE      S  ++ E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I
Subjt:  VGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI

Query:  HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
         V+ DSKLVCMQ++G WK  HE +S+L  E  +L +K LSFE++HVLR
Subjt:  HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR

AT5G51080.2 RNase H family protein4.8e-6842.53Show/hide
Query:  MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKG
        MN FS+  +Y + V+FR+++ V          S+  W   F+  ++K++   +  S   + CYS+R      K +  S  +      + E   FFVVRKG
Subjt:  MNCFSQVSTY-TRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKG

Query:  DVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPEN
        D+VG+YK   DCQAQ+GSS+ D PVSV+KG+SL KDTEE L++VGLK  LY  +A D++ D+FG+L PC F             QD +            
Subjt:  DVVGVYKSFSDCQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPEN

Query:  VGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI
               P+      K  +LE      S  ++ E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I
Subjt:  VGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI

Query:  HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR
         V+ DSKLVCMQ++G WK  HE +S+L  E  +L +K LSFE++HVLR
Subjt:  HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGCTTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATGCCTACTGGAC
CTCATCCTTTCACAATGTCGCTGTAAAGACTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCCA
CTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCCGTGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGAT
TGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAA
CGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGCGCCTTGCACTTTTCATGGTGGAGATACCTCTCTTACAGGTGAGACTTCTGGCC
AGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTACCCGAAAATGTTGGGTCAACTGTTTTAACTCCTACATTAAAAGATCCCACGAGGAAACATATTAAGTTGGAA
GATTCCATTGTGTCCCATTCAGTATCCTCCAACCGGGAATCTTGCTTTCTAGAATTTGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCG
AGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTCTGCTCTTAAGA
AAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAAGCAAAACATGAAAACATGTCTGAGTTATGTAATGAAGTT
ACGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGGTCAGTACCATTAATTCTTCTCTATTTGCGTCTCTCACAATGTTGTTTAGTTTGTTTCT
GTTTATACTGTTGGGAGCATTACACTTTTGGGATCAAAGGTTCAGTTTAAGTTTAGGTTACATTTGGGTCCTTAAGTTTCGAAACTTAATAATTTTACGCAGGAGGTTTG
CAAGTAGCACCGTTGGTCCATCTGTCGGGTTTCGGTTAATTACCAATGGAAGGCTGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGCTTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATGCCTACTGGAC
CTCATCCTTTCACAATGTCGCTGTAAAGACTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCCA
CTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCCGTGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGAT
TGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAA
CGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGCGCCTTGCACTTTTCATGGTGGAGATACCTCTCTTACAGGTGAGACTTCTGGCC
AGGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTACCCGAAAATGTTGGGTCAACTGTTTTAACTCCTACATTAAAAGATCCCACGAGGAAACATATTAAGTTGGAA
GATTCCATTGTGTCCCATTCAGTATCCTCCAACCGGGAATCTTGCTTTCTAGAATTTGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCG
AGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTCTGCTCTTAAGA
AAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAAGCAAAACATGAAAACATGTCTGAGTTATGTAATGAAGTT
ACGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGGTCAGTACCATTAATTCTTCTCTATTTGCGTCTCTCACAATGTTGTTTAGTTTGTTTCT
GTTTATACTGTTGGGAGCATTACACTTTTGGGATCAAAGGTTCAGTTTAAGTTTAGGTTACATTTGGGTCCTTAAGTTTCGAAACTTAATAATTTTACGCAGGAGGTTTG
CAAGTAGCACCGTTGGTCCATCTGTCGGGTTTCGGTTAATTACCAATGGAAGGCTGATGTGA
Protein sequenceShow/hide protein sequence
MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSD
CQAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLE
DSIVSHSVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEV
TKLKNKFLSFEVNHVLRVSTINSSLFASLTMLFSLFLFILLGALHFWDQRFSLSLGYIWVLKFRNLIILRRRFASSTVGPSVGFRLITNGRLM