CuGenDBv2

Gene ID	Cucsat.G10465
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	ATP synthase subunit d, mitochondrial
Genome location	ctg1678:667628..670325
RNA-Seq Expression	Cucsat.G10465
Synteny	Cucsat.G10465
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

4.51e-114

100

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_008446913.1 PREDICTED: ATP synthase subunit d, mitochondrial [Cucumis melo]

5.05e-111

97.02

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

3.42e-109

95.24

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

3.42e-109

95.24

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

1.19e-109

95.83

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

2.18e-114

100

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A1S3BH29 ATP synthase subunit d, mitochondrial

2.45e-111

97.02

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

2.45e-111

97.02

Show/hide

Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

1.65e-109

95.24

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

E5GCK9 ATP synthase subunit d, mitochondrial

2.45e-111

97.02

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Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

2.7e-75

82.14

Show/hide

Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIA+VQE+ KK+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

1.9e-76

82.14

Show/hide

Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIA+VQE+ KK+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

2.0e-46

77.78

Show/hide

Query:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YK
Subjt:  MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGTACCATCAAGAAAGTCACCGATGTTGCCTTCAAAGCATCCAAAAATATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGAAAGGAGTT
CTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAGCCCTCCAGACTAAATTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGATCCCCAAGTTCGTAGACACAGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGCTGGTAGAATTG
AAGGAAGCTGAAGCAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGCTGAAGTTCAAGAAATGAAGAAAAAGATCTGCACCATGACTGCTGATGAATACTT
TGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAATCCGAAATGACTACTGGGGCTATTGA

mRNA sequence

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Protein sequence

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MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVEL
KEAEAKSLKESERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Cucsat.G10465 (gene) of Cucumber (B10) v3 genome