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Cucsat.G10480 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10480
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationctg1678:942014..946645
RNA-Seq ExpressionCucsat.G10480
SyntenyCucsat.G10480
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648872.1 hypothetical protein Csa_008170 [Cucumis sativus]1.05e-8599.22Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYK
        YV+GREGLVQDFGAKDQGRSNFLKNFYK
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYK

XP_004142382.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus]5.12e-8999.24Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YV+GREGLVQDFGAKDQGRSNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]2.00e-8696.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]1.36e-8493.94Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV T+SQ+RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]1.16e-8596.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD GAKDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein2.48e-8999.24Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YV+GREGLVQDFGAKDQGRSNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.71e-8796.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.11e-8189.39Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDVAT+SQLRS++AS+IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVG EGLVQD G KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.09e-8393.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIM+IYNLDDV T SQ+RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.20e-8392.42Show/hide
Query:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIM+IYNLDDV T+S +RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.8e-0836.36Show/hide
Query:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.4e-0935.23Show/hide
Query:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.8e-0836.36Show/hide
Query:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.4e-0938.64Show/hide
Query:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.6e-4972.31Show/hide
Query:  FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG+++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein1.8e-5072.31Show/hide
Query:  FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG+++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCCGCGAGTCTTGAAGAAGCCCGGAGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGC
AATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAACATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAA
GATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCCGCGAGTCTTGAAGAAGCCCGGAGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGC
AATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAACATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAA
GATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGA
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQ
DFGAKDQGRSNFLKNFYKSNYF