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Cucsat.G10499 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10499
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRAB6-interacting golgin
Genome locationctg1678:69670..72819
RNA-Seq ExpressionCucsat.G10499
SyntenyCucsat.G10499
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]4.14e-7998.54Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]7.05e-8199.28Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]3.33e-7997.83Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

XP_022150510.1 uncharacterized protein LOC111018644 [Momordica charantia]9.02e-6382.61Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

XP_038892385.1 uncharacterized protein LOC120081508 [Benincasa hispida]1.96e-6486.23Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNG GGN          DRNEDE +SKLT+STLQAREEEIE+KKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKE KEVQDIFNEKSNEKAQLLATLME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin3.41e-8199.28Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

A0A1S3BFW5 RAB6-interacting golgin1.61e-7997.83Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

A0A5D3CFS0 RAB6-interacting golgin2.00e-7998.54Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME

A0A6J1D8N9 RAB6-interacting golgin4.37e-6382.61Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  N +R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVELQL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LME+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

A0A6J1HTV1 RAB6-interacting golgin5.10e-6382.73Show/hide
Query:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSK-LTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GN +R++ EGS  R+ED  + K LTVSTLQAREEEIER+KMEVKEKVELQL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNEDRVLLEGSNDRNEDETVSK-LTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        LKSLGQICQKKEKEYKEV +IFNEK+NEKAQLL TLMEV
Subjt:  LKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)5.1e-2754.17Show/hide
Query:  SNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQ
        S+   EDE +++  +S  +A+E+EIE+++MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  
Subjt:  SNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQ

Query:  DIFNEKSNEKAQLLATLMEV
        D FNEK+ EK QL+  LME+
Subjt:  DIFNEKSNEKAQLLATLMEV

AT3G09980.1 Family of unknown function (DUF662)1.6e-2859.13Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +S+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  + FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLMEV
        K+ EK QL+  LME+
Subjt:  KSNEKAQLLATLMEV

AT3G52900.1 Family of unknown function (DUF662)2.4e-2953.79Show/hide
Query:  MTSKNGGGGNEDRVLLEGSN-------DRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRI
        M+SKN  G       + G N       + NE+E + K+ V+  QAREEEIERKKM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+I
Subjt:  MTSKNGGGGNEDRVLLEGSN-------DRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRI

Query:  DTVKRELKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV
        D   R++KSL Q CQKKEKEYK+  + FNEK+ EKA L++ LME+
Subjt:  DTVKRELKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMEV

AT3G52920.1 Family of unknown function (DUF662)3.5e-2858.26Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  D FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLMEV
        K+ EK QL+  LME+
Subjt:  KSNEKAQLLATLMEV

AT3G52920.2 Family of unknown function (DUF662)3.5e-2858.26Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  D FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLMEV
        K+ EK QL+  LME+
Subjt:  KSNEKAQLLATLMEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTAAGAACGGAGGCGGAGGAAACGAGGATAGAGTTCTATTGGAAGGAAGTAATGATCGGAACGAAGATGAAACGGTGTCTAAGCTCACCGTATCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAAATGGAAGTAAAAGAGAAGGTTGAACTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGGTTGGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGTAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAAGAAG
GAAAAAGAATACAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAATGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGGTATATAATTCTATAAAATCATTTGTAAA
TTTTCCTATATTTTATTGGCAACAAAAATATTTTCTTAAATTATCCATTTGTGCATATGGTCATGATCTTATCAGCTGTTGGGGCAGAGTGAGAAATGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTAAGAACGGAGGCGGAGGAAACGAGGATAGAGTTCTATTGGAAGGAAGTAATGATCGGAACGAAGATGAAACGGTGTCTAAGCTCACCGTATCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAAATGGAAGTAAAAGAGAAGGTTGAACTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGGTTGGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGTAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAAGAAG
GAAAAAGAATACAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAATGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGGTATATAATTCTATAAAATCATTTGTAAA
TTTTCCTATATTTTATTGGCAACAAAAATATTTTCTTAAATTATCCATTTGTGCATATGGTCATGATCTTATCAGCTGTTGGGGCAGAGTGAGAAATGGAGGATGA
Protein sequenceShow/hide protein sequence
MTSKNGGGGNEDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVELQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
EKEYKEVQDIFNEKSNEKAQLLATLMEVYNSIKSFVNFPIFYWQQKYFLKLSICAYGHDLISCWGRVRNGG