; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10550 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10550
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationctg1678:855510..858978
RNA-Seq ExpressionCucsat.G10550
SyntenyCucsat.G10550
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]6.47e-21294.67Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQD----------------ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQD                ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQD----------------ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

Query:  NAFPSISHLHLDSGNHHRE
        NAFPSISHLHLDSGNHHRE
Subjt:  NAFPSISHLHLDSGNHHRE

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]6.71e-217100Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
        HRE
Subjt:  HRE

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]2.73e-21699.67Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
        HRE
Subjt:  HRE

XP_022956997.1 protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]3.12e-17986.14Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   QPPPN   PD+++DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        N+G D+ VKGD GDGS+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        + AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+SGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
         R+
Subjt:  HRE

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]1.80e-19893.4Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLL ATPCLPP QP PN  T DDVTDR+R+ +NLKRTQDFGFGKG+SL+ G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NN SDE VKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        S AAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
        HR+
Subjt:  HRE

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein3.25e-217100Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
        HRE
Subjt:  HRE

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 11.32e-21699.67Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
        HRE
Subjt:  HRE

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 13.13e-21294.67Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQD----------------ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQD                ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQD----------------ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

Query:  NAFPSISHLHLDSGNHHRE
        NAFPSISHLHLDSGNHHRE
Subjt:  NAFPSISHLHLDSGNHHRE

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 16.13e-17886.73Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQT-QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGP
        MLGLRDVLFIAPTPSSLHQQT QIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG 
Subjt:  MLGLRDVLFIAPTPSSLHQQT-QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGP

Query:  GNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSAAAAAAAS-----TSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH
        QS AAAAAAS     TSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Subjt:  QSAAAAAAAS-----TSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH

Query:  LDSGNHHRE
        L+SGNHH +
Subjt:  LDSGNHHRE

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like1.51e-17986.14Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   QPPPN   PD+++DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        N+G D+ VKGD GDGS+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
        + AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+SGNH
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH

Query:  HRE
         R+
Subjt:  HRE

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 13.7e-2739.71Show/hide
Query:  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
        D G G G S     + AG         V   +G G ++ C+DCGN+AKK+C++ RCRTCCK RG  C THVKSTWVPAA+RRERQ  +           G
Subjt:  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG

Query:  GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG
         ++ +++   KR R     +  +A++  ST   +     E              P  VR  AVF+C ++++I   E +LAYQA V+IGGHVFKG LYDQG
Subjt:  GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG

Query:  ADDK
         + +
Subjt:  ADDK

O65517 Protein SHI RELATED SEQUENCE 23.3e-3148.78Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +        ++S++  P S 
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF

Query:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD
               +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Subjt:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 19.4e-5545.95Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K  FPS+S L
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL

Query:  HL-DSGNHH
        HL  S N+H
Subjt:  HL-DSGNHH

Q9M2U4 Protein SHI RELATED SEQUENCE 61.9e-3144.83Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS

Query:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS
          TT+S Q+  F++ LPG + APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D   AFP +S
Subjt:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS

Q9SD40 Protein SHI RELATED SEQUENCE 12.0e-2837.08Show/hide
Query:  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGD
        H Q +I+     H   L L SS A G+ VG                 P+NH   D++                   GE+  AG G   +   ++ G +G 
Subjt:  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGD

Query:  GSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNA
        GS  V C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +      T    G S        KR R  +P+ S++       S+ 
Subjt:  GSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNA

Query:  TTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG
                 S  +  +F    P  V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G
Subjt:  TTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG

Arabidopsis top hitse value%identityAlignment
AT3G54430.1 SHI-related sequence 61.4e-3244.83Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS

Query:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS
          TT+S Q+  F++ LPG + APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D   AFP +S
Subjt:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS

AT4G36260.1 Lateral root primordium (LRP) protein-related2.3e-3248.78Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +        ++S++  P S 
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF

Query:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD
               +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Subjt:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD

AT5G12330.1 Lateral root primordium (LRP) protein-related6.7e-5645.95Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K  FPS+S L
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL

Query:  HL-DSGNHH
        HL  S N+H
Subjt:  HL-DSGNHH

AT5G12330.2 Lateral root primordium (LRP) protein-related6.7e-5645.95Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K  FPS+S L
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL

Query:  HL-DSGNHH
        HL  S N+H
Subjt:  HL-DSGNHH

AT5G12330.4 Lateral root primordium (LRP) protein-related6.7e-5645.95Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K  FPS+S L
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL

Query:  HL-DSGNHH
        HL  S N+H
Subjt:  HL-DSGNHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTC
CACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTTCCTCCCTCCCAGCCCCCACCAAATAATCACACACCTGACGATGTTACCGATC
GTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGC
GATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTG
CTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCG
GTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGCTTTGAA
ACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGG
TGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCC
ATTTGGACAGTGGTAACCACCACAGGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTC
CACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTTCCTCCCTCCCAGCCCCCACCAAATAATCACACACCTGACGATGTTACCGATC
GTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGC
GATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTG
CTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCG
GTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGCTTTGAA
ACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGG
TGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCC
ATTTGGACAGTGGTAACCACCACAGGGAATAG
Protein sequenceShow/hide protein sequence
MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKG
DAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFE
TTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE