; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10579 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10579
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSWR1 complex subunit 6
Genome locationctg1679:433041..435547
RNA-Seq ExpressionCucsat.G10579
SyntenyCucsat.G10579
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0043486 - histone exchange (biological process)
GO:0048638 - regulation of developmental growth (biological process)
GO:0000812 - Swr1 complex (cellular component)
GO:0031491 - nucleosome binding (molecular function)
GO:0042802 - identical protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143171.1 SWR1 complex subunit 6 [Cucumis sativus]1.14e-113100Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_008463835.1 PREDICTED: SWR1 complex subunit 6 [Cucumis melo]1.33e-11298.83Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+EVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHEANLESLPPHVPSY KAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_022943643.1 SWR1 complex subunit 6 [Cucurbita moschata]3.50e-10693.6Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_023512985.1 SWR1 complex subunit 6 isoform X1 [Cucurbita pepo subsp. pepo]7.01e-10693.6Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_038901863.1 SWR1 complex subunit 6 [Benincasa hispida]1.27e-10896.51Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TNPFRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAGVE VENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

TrEMBL top hitse value%identityAlignment
A0A0A0KH15 HIT-type domain-containing protein5.53e-114100Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A1S3CKL9 SWR1 complex subunit 66.46e-11398.83Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+EVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHEANLESLPPHVPSY KAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1D2Z0 SWR1 complex subunit 6 isoform X12.81e-10593.6Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+E+VENIDDEDASLDDDD AYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEANLESLPP+VPSYLKAAVGPPSS+SRRHFCTVCGFAA+YTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1FTL5 SWR1 complex subunit 61.69e-10693.6Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1JHH9 SWR1 complex subunit 63.42e-10693.02Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSY+KAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

SwissProt top hitse value%identityAlignment
O43257 Zinc finger HIT domain-containing protein 11.9e-1235.67Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L           DD D    K++++G   K R           K F
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
          LL E NL       P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q24JY4 Zinc finger HIT domain-containing protein 11.9e-1235.67Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L           DD D    K++++G   K R           K F
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
          LL E NL       P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q54NW0 Zinc finger HIT domain-containing protein 1 homolog4.9e-1633.96Show/hide
Query:  SSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRK--TRQAKALEAKKAPKTFMELLHEANL
        SS+ +    K     +  D R    +   ARLE+L++DN    +    D+ED   +DD+   +       KR    R+ K  E K     F ++L ++ L
Subjt:  SSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRK--TRQAKALEAKKAPKTFMELLHEANL

Query:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRC
        E+ P HVP+Y+ +    PS    RHFC++CG+  +YTC +C  R+CS +C N HN+TRC
Subjt:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRC

Q8R331 Zinc finger HIT domain-containing protein 11.3e-1339.72Show/hide
Query:  RLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSST
        +LEALENDN         DD  A L           DD D    K++++G   K R           K F  LL E NL +     P+YL A  GPP S 
Subjt:  RLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSST

Query:  SRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
         +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  SRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q9FHW2 SWR1 complex subunit 61.4e-6071.68Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +EV++  DDE+ASLD DDD  Y+ K+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        +ELL EANLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

Arabidopsis top hitse value%identityAlignment
AT5G37055.1 HIT-type Zinc finger family protein1.0e-6171.68Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +EV++  DDE+ASLD DDD  Y+ K+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        +ELL EANLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGATTCTACGAATCCATTCCGACGTATGTCGAGCCGTACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCCAGCAGCGACAACCGTACGCAGGCAGC
ACTTGCTCGTCTAGAGGCATTGGAAAATGACAATGCGGGAGTGGAAGTAGTCGAAAACATTGACGATGAGGATGCTTCTCTCGATGATGATGATCAAGCATACATAAAGC
GGCAATCAAAGGGCACTAAACGGAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAAGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGCAAATTTGGAGTCATTG
CCTCCACATGTTCCATCATACTTGAAGGCGGCCGTTGGACCTCCAAGCTCTACCTCACGCCGGCATTTCTGCACAGTTTGCGGTTTTGCTGCGAGCTACACGTGCATAAG
GTGTGGAATCCGCTTTTGTTCATCTCGTTGCCAGAATATACATAACGATACTCGTTGTTTGAAATTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGATTCTACGAATCCATTCCGACGTATGTCGAGCCGTACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCCAGCAGCGACAACCGTACGCAGGCAGC
ACTTGCTCGTCTAGAGGCATTGGAAAATGACAATGCGGGAGTGGAAGTAGTCGAAAACATTGACGATGAGGATGCTTCTCTCGATGATGATGATCAAGCATACATAAAGC
GGCAATCAAAGGGCACTAAACGGAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAAGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGCAAATTTGGAGTCATTG
CCTCCACATGTTCCATCATACTTGAAGGCGGCCGTTGGACCTCCAAGCTCTACCTCACGCCGGCATTTCTGCACAGTTTGCGGTTTTGCTGCGAGCTACACGTGCATAAG
GTGTGGAATCCGCTTTTGTTCATCTCGTTGCCAGAATATACATAACGATACTCGTTGTTTGAAATTTGTTGCCTAA
Protein sequenceShow/hide protein sequence
MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESL
PPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA