| GenBank top hits | e value | %identity | Alignment |
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 3.22e-151 | 97.78 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMF GRESASTSKNTSTHMAKRW
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 4.09e-154 | 100 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMFSGRESASTSKNTSTHMAKRW
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 3.77e-149 | 97.77 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKR
KKPMF GRESASTSKNTSTHMAKR
Subjt: KKPMFSGRESASTSKNTSTHMAKR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 2.20e-149 | 97.77 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKR
KKPMF GRESASTSKNTSTHMAKR
Subjt: KKPMFSGRESASTSKNTSTHMAKR
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| XP_038900478.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] | 4.39e-149 | 97.33 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGGS YGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMFSGRESASTSKNTST MAKRW
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 1.83e-149 | 97.77 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKR
KKPMF GRESASTSKNTSTHMAKR
Subjt: KKPMFSGRESASTSKNTSTHMAKR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 1.06e-149 | 97.77 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKR
KKPMF GRESASTSKNTSTHMAKR
Subjt: KKPMFSGRESASTSKNTSTHMAKR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.56e-151 | 97.78 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMF GRESASTSKNTSTHMAKRW
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 1.58e-135 | 86.67 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMFSGR+SASTSK+T+THMA++W
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 5.50e-136 | 87.11 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+EST V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
YEAKM+DIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DI ST
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISST
Query: KKPMFSGRESASTSKNTSTHMAKRW
KKPMFSGR+SASTSK+T+THMA++W
Subjt: KKPMFSGRESASTSKNTSTHMAKRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 4.1e-50 | 48.6 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKK
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IS+ KK
Subjt: KMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKK
Query: PMFSGRESASTSKN
S S STS++
Subjt: PMFSGRESASTSKN
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 2.0e-49 | 47.66 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKK
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IS+ K+
Subjt: KMEDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKK
Query: PMFSGRESASTSKN
S + STS++
Subjt: PMFSGRESASTSKN
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