CuGenDBv2

Gene ID	Cucsat.G1062
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	protein PAIR1 isoform X1
Genome location	ctg1:7305748..7310589
RNA-Seq Expression	Cucsat.G1062
Synteny	Cucsat.G1062
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134325.2 putative recombination initiation defects 3 [Cucumis sativus]

1.40e-284

99.76

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Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP+SYSKEDSQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSNLIIIN
Subjt:  KRKYSNLIIIN

XP_008438046.1 PREDICTED: protein PAIR1 isoform X1 [Cucumis melo]

2.42e-269

95.13

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

XP_008438047.1 PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]

9.09e-267

94.89

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQQ CLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

XP_008438048.1 PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]

7.18e-266

94.65

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQ  CLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

1.81e-250

88.32

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Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPP SRR NALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+ED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        L +SKSSTSLTQ+W+P+PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKML+NSSSLQSMNKDHDDMKA +DGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLIS+QLKKDAYQERL+EIS+ LSSLEKQVQASQLKLKNDFISTFT+E+KAM+CTLKNPLQKFPPHSIQSPES ACLDVP+QK+ RCKIQSA+PNVC +
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVG WKSVKVGK FCT SV K+DDP KVIPFSEQQ+ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV YYSIE+AK+E++RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKY N IIIN
Subjt:  KRKYSNLIIIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L487 Uncharacterized protein

9.51e-240

99.15

Show/hide

Query:  RRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQLGISKSSTSLTQKWRPSPLPD
        +RLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP+SYSKEDSQLGISKSSTSLTQKWRPSPLPD
Subjt:  RRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQLGISKSSTSLTQKWRPSPLPD

Query:  SKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEIS
        SKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEIS
Subjt:  SKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEIS

Query:  DFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAF
        DFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAF
Subjt:  DFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAF

Query:  CTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKT
        CTSSVVKRDDPNKVIPFSEQQ CLVLEREYRVIVDSDEEIERSFSCLIEEKKT
Subjt:  CTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKT

A0A1S3AV35 protein PAIR1 isoform X2

4.40e-267

94.89

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQQ CLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

A0A1S3AVJ5 protein PAIR1 isoform X3

3.48e-266

94.65

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQ  CLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

A0A1S4DSK1 protein PAIR1 isoform X1

1.17e-269

95.13

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKYSN IIIN
Subjt:  KRKYSNLIIIN

A0A6J1FY69 protein PAIR1 isoform X1

2.62e-231

82.48

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQA QLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+E+ Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQ

Query:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG
        L +SKSSTSLTQ+W+ +PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL  DIL LN+GMKQ+SLDVE IWQK+++NSS LQSMNK+HDDMK+ +DGG
Subjt:  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ
        FKLISDQLKKDAYQERLHEISD LS+LEKQVQASQLKL+NDFISTFT+EMKAM+CTLK PLQKFP   I+SPES A LDVP+QK+RRCKIQSA+P+VC +
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQ

Query:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ
        AT VQ EEVG WKSVKVGK FCTS+V K++D  K IPFSEQ+  LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+DV +YSIE+AK+ET RILRKARRQ
Subjt:  ATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQ

Query:  KRKYSNLIIIN
        KRKY N IIIN
Subjt:  KRKYSNLIIIN

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

5.2e-64

37.47

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Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK

Query:  EDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAI
        EDSQL  S+SS+ L+++W  + + +SK Q+ EEL++R G +E S+++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SLQ + K+  D KA 
Subjt:  EDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAI

Query:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSA---
        +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +   TFT+E++ ++ +L+ P  +    +  +P+  A  ++P+Q+ +  K+ ++   
Subjt:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSA---

Query:  -APNVCTQATGVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCL
          P V   A    KE                                               +VG WK+VK  K    S+  KR     V   S + Q  
Subjt:  -APNVCTQATGVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCL

Query:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIIIN
            +  V++DSDEE I+  FSCLI E   G +  +    +A+KET RILR ARR KRK+ N IIIN
Subjt:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIIIN

Q75RY2 Protein PAIR1

9.9e-31

29.76

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Query:  MRLKINKACDLSSISVLPPQ--SRRLNALTTGQ----QASQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENS
        M+LK+NKACD++SISVLPP+       A  +G      ASQ RSQP   SQQSFSQG S+   H   SQ SQ S D+ +       T +QRF   D  +S
Subjt:  MRLKINKACDLSSISVLPPQ--SRRLNALTTGQ----QASQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENS

Query:  IKKNSFFPPLSYS--KEDSQLGISKSSTSLTQKWRPSPLPDSKCQV-GEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLIN
         K+ S  P  S S  +E+SQL ++K  ++   +W PS       QV  E+++R+   + +SV+K G ++DS+ SD++QLN+ MK+ SLD  SI QK+ + 
Subjt:  IKKNSFFPPLSYS--KEDSQLGISKSSTSLTQKWRPSPLPDSKCQV-GEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLIN

Query:  SSSLQSMNKDHDDMKAIIDGGFKLISDQLK-KDAYQERLHEISDFLSSLEKQVQASQL----------------------------------KLKNDFIS
         SSLQ + K  DD+KA+     K   DQ    ++   +L+EIS  L++L+ Q+QA QL                                  +L+ D   
Subjt:  SSSLQSMNKDHDDMKAIIDGGFKLISDQLK-KDAYQERLHEISDFLSSLEKQVQASQL----------------------------------KLKNDFIS

Query:  TFTKEMKAMICTLKN------PLQKFPPHSIQSPESNACLDV---------------PKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAFCT
         FTKEM+ ++  +++       +Q     S Q P SN    +               P    R    Q     V +       +   +   V+ GK    
Subjt:  TFTKEMKAMICTLKN------PLQKFPPHSIQSPESNACLDV---------------PKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAFCT

Query:  SSVVKRDDPNKVIPFSEQQ-------QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIII
                  +V P  E+        Q    +    +I++SD++ E   SC+I + +TG    +   ++  +E   ILR+AR+++R+    I++
Subjt:  SSVVKRDDPNKVIPFSEQQ-------QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIII

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

3.7e-65

37.47

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK

Query:  EDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAI
        EDSQL  S+SS+ L+++W  + + +SK Q+ EEL++R G +E S+++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  +SLQ + K+  D KA 
Subjt:  EDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAI

Query:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSA---
        +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +   TFT+E++ ++ +L+ P  +    +  +P+  A  ++P+Q+ +  K+ ++   
Subjt:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSA---

Query:  -APNVCTQATGVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCL
          P V   A    KE                                               +VG WK+VK  K    S+  KR     V   S + Q  
Subjt:  -APNVCTQATGVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCL

Query:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIIIN
            +  V++DSDEE I+  FSCLI E   G +  +    +A+KET RILR ARR KRK+ N IIIN
Subjt:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIIIN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTCCAGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCATCACAGTTGCG
ATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGAT
TTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATAGTCAATTGGGAATCTCTAAATCTTCAACCAGTTTA
ACACAAAAATGGAGACCTAGTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCAGTAAACAAGTTTGGAAAGAT
CTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTATTAACAGTAGCTCGCTGC
AATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGTTGCATGAGATT
TCGGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCTTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGCAATGATCTGTACCTT
GAAGAACCCCTTGCAGAAATTTCCACCTCACTCTATTCAATCTCCCGAGAGTAATGCTTGTTTGGATGTTCCAAAGCAGAAGCAACGTCGATGTAAAATTCAATCTGCGG
CTCCAAATGTTTGCACTCAAGCAACTGGAGTACAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGTAGTGTGGTGAAAAGGGAT
GATCCAAATAAAGTAATTCCATTTTCTGAACAGCAGCAGTGCCTGGTGCTAGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTG
CTTAATTGAAGAGAAGAAAACAGGAAAAGATGTACATTACTATTCCATAGAAGAGGCCAAGAAAGAAACTTCCAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAAT
ACAGCAATCTTATAATTATTAATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRLKINKACDLSSISVLPPQSRRLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDSQLGISKSSTSL
TQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEI
SDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMICTLKNPLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVKVGKAFCTSSVVKRD
DPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVHYYSIEEAKKETSRILRKARRQKRKYSNLIIIN

Cucsat.G1062 (gene) of Cucumber (B10) v3 genome