; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10709 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10709
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg1681:1281318..1283141
RNA-Seq ExpressionCucsat.G10709
SyntenyCucsat.G10709
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08129.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]6.03e-15291.94Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLK LV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI

XP_008451190.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis melo]1.48e-15292.34Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI

XP_022952712.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]9.42e-13383.4Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLAT  S TI SP      S G    L+LGR EGY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVRKE WYKPQVSLYADI++VLASNGLFE+VQII SY KAE DLAPEI+GFN LLKALVS+NLGELAMESYYLMK+VGCEPDK 
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS
        SFRIVIKGLES  E+VDLRTVK+DAQ LYGESLEFLEEE+E AT  S
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS

XP_031744771.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus]2.54e-169100Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ
        SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ

XP_038888189.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Benincasa hispida]7.50e-14689.47Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL  P SPTI SP  K  SS G A CL LGRAEGY +VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADII VLASNGLFERVQII SY+KAE DLAPEIDGFNALLKALVSHNLGELAMESYYLMK++GCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS
        SFRIVIKGLESKGEAVDLRTVKQDAQ+LYGESLEFLEEEEE A A S
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS

TrEMBL top hitse value%identityAlignment
A0A0A0K6A9 Uncharacterized protein1.23e-169100Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ
        SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSIQ

A0A1S3BRZ8 pentatricopeptide repeat-containing protein At3g46870-like7.18e-15392.34Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI

A0A5A7UZI6 Pentatricopeptide repeat-containing protein7.18e-15392.34Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI

A0A5D3CCT4 Pentatricopeptide repeat-containing protein2.92e-15291.94Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLK LV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATSI

A0A6J1HX85 protein THYLAKOID ASSEMBLY 8-like, chloroplastic4.56e-13383.4Show/hide
Query:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLAT  S TI SP      S G    L+LGR EGY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA
        ELLRQNECSLALKVFEDVRKE WYKPQVSLYADI++VLASNGLFE+VQII SY+KAE DLAPEI+GFN LLKALVS+NLGELAMESYYLMK+VGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKA

Query:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS
        SFRIVIKGLES  E+VDLR VK+DAQ LYGESLEFLEEE+E AT  S
Subjt:  SFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEEEGATATS

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351307.1e-0829.36Show/hide
Query:  KEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLR
        + H  KP +  Y  ++   A  GL E+ + I   ++ E  L P++  +NAL+++         A E + LM+ +GCEPD+AS+ I++      G   D  
Subjt:  KEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLR

Query:  TVKQDAQRL
         V ++ +RL
Subjt:  TVKQDAQRL

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623505.4e-1633.55Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR+E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE

Query:  ADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGL
          L  +   F  L++  + + L   AM  Y  M++    P    FR+++KGL
Subjt:  ADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic2.4e-1636.72Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKP-QVSLYADIITVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKP-QVSLYADIITVLASNG

Query:  LFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-----CEPDKASFRIVIKGLESKGE
         F+ +  ++  +    D   +      L++A+V     E  +  Y LM++ G      E D+    ++ KGL   GE
Subjt:  LFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-----CEPDKASFRIVIKGLESKGE

Q9SCP4 Pentatricopeptide repeat-containing protein At3g531704.2e-0826.85Show/hide
Query:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEA
        ++  + +  + RT   ++ ++R  +S K   L    +L  L E +++N    ALK+F  +RK+HWY+P+   Y  +  VL +    ++  ++   M +E 
Subjt:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEA

Query:  DLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-CEPDKASFRIVI
         L P ID + +L+       L + A  +   MK V  C+PD  +F ++I
Subjt:  DLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-CEPDKASFRIVI

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.4e-1933.68Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERV
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++K+ WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERV

Query:  QIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE
          +   MK E +L P+   +  +++  +       AM  Y  M      P++  FR+++KGL      +    VK+D + L+ E   +   EE
Subjt:  QIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-1733.55Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR+E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE

Query:  ADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGL
          L  +   F  L++  + + L   AM  Y  M++    P    FR+++KGL
Subjt:  ADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.7e-1736.72Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKP-QVSLYADIITVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKP-QVSLYADIITVLASNG

Query:  LFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-----CEPDKASFRIVIKGLESKGE
         F+ +  ++  +    D   +      L++A+V     E  +  Y LM++ G      E D+    ++ KGL   GE
Subjt:  LFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-----CEPDKASFRIVIKGLESKGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-2133.68Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERV
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++K+ WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERV

Query:  QIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE
          +   MK E +L P+   +  +++  +       AM  Y  M      P++  FR+++KGL      +    VK+D + L+ E   +   EE
Subjt:  QIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE

AT3G53170.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-0926.85Show/hide
Query:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEA
        ++  + +  + RT   ++ ++R  +S K   L    +L  L E +++N    ALK+F  +RK+HWY+P+   Y  +  VL +    ++  ++   M +E 
Subjt:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEA

Query:  DLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-CEPDKASFRIVI
         L P ID + +L+       L + A  +   MK V  C+PD  +F ++I
Subjt:  DLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVG-CEPDKASFRIVI

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.5e-6156.7Show/hide
Query:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWY
        + MR  S+NRKPLQ+GR LSIEAIQAVQ+LKR               T      LDRV  SK RRLLKFDM+AVLRELLRQNECSLALKVFE++RKE+WY
Subjt:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRKEHWY

Query:  KPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQD
        KPQV +Y D+ITV+A N L E V  + S MK+E  L  EI+ FN LL  L++H L +L M+ Y  M+ +G EPD+ASFR+++ GLES GE      V+QD
Subjt:  KPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQD

Query:  AQRLYGESLEFLEEEEEGATATSI
        A   YGESLEF+EE+EE ++ TS+
Subjt:  AQRLYGESLEFLEEEEEGATATSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTTAGCAACTCCTTCGTCGCCGACGATTTTCAGTCCGCTACTCAAGTTTCCAAGCTCTGTCGGGACAGCATGCTGCCTGCAACTAGGTAGGGCGGAGGGATA
TCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCCGTGCAATCGTTGAAGCGAACGAAGA
AAGATTTACAACAGTTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTCCGCCAGAACGAGTGTTCTTTG
GCTCTTAAGGTTTTCGAAGATGTTAGAAAAGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGT
ACAAATTATTCTTTCGTACATGAAAGCAGAGGCTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTAGTCATAATTTAGGTGAACTGGCGA
TGGAGTCGTATTATTTGATGAAGGATGTAGGTTGTGAACCAGATAAGGCTTCTTTCAGGATTGTCATAAAAGGATTGGAATCAAAGGGAGAGGCAGTTGATTTAAGAACT
GTGAAACAGGATGCACAAAGGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGAAGAAGAGGGAGCTACAGCCACATCTATACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCTTAGCAACTCCTTCGTCGCCGACGATTTTCAGTCCGCTACTCAAGTTTCCAAGCTCTGTCGGGACAGCATGCTGCCTGCAACTAGGTAGGGCGGAGGGATA
TCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCCGTGCAATCGTTGAAGCGAACGAAGA
AAGATTTACAACAGTTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTCCGCCAGAACGAGTGTTCTTTG
GCTCTTAAGGTTTTCGAAGATGTTAGAAAAGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGT
ACAAATTATTCTTTCGTACATGAAAGCAGAGGCTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTAGTCATAATTTAGGTGAACTGGCGA
TGGAGTCGTATTATTTGATGAAGGATGTAGGTTGTGAACCAGATAAGGCTTCTTTCAGGATTGTCATAAAAGGATTGGAATCAAAGGGAGAGGCAGTTGATTTAAGAACT
GTGAAACAGGATGCACAAAGGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGAAGAAGAGGGAGCTACAGCCACATCTATACAATGA
Protein sequenceShow/hide protein sequence
MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSL
ALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRT
VKQDAQRLYGESLEFLEEEEEGATATSIQ