CuGenDBv2

Gene ID	Cucsat.G10718
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	RING-type E3 ubiquitin transferase
Genome location	ctg1681:1397410..1401933
RNA-Seq Expression	Cucsat.G10718
Synteny	Cucsat.G10718
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23276.1 uncharacterized protein E5676_scaffold142G003320 [Cucumis melo var. makuwa]

2.10e-105

96.93

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKAR
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

4.12e-109

91.26

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR     +L  + +L    P I
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

1.31e-105

87.98

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKAR     +L  + +L    P I
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI

XP_031744200.1 uncharacterized protein At5g43822 isoform X1 [Cucumis sativus]

1.01e-140

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYINSWLTNLTLRKRKLNSS
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYINSWLTNLTLRKRKLNSS
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYINSWLTNLTLRKRKLNSS

Query:  LILYWF
        LILYWF
Subjt:  LILYWF

XP_031744201.1 uncharacterized protein At5g43822 isoform X3 [Cucumis sativus]

5.38e-108

100

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

2.00e-109

91.26

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI
        GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR     +L  + +L    P I
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI

A0A1S3BHR8 uncharacterized protein At5g43822 isoform X4

9.58e-105

96.3

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKA
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

6.36e-106

87.98

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKAR     +L  + +L    P I
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

2.68e-102

86.89

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKAR     +L  + +L    P I
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYI

A0A5D3DI19 Uncharacterized protein

1.02e-105

96.93

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALL KQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKAR
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKAR

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

1.7e-31

45.34

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWK
        G QL +  S++   +++++++G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWK

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

1.2e-32

45.34

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + GI +A++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWK
        G QL +  S++   +++++++G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K
Subjt:  GKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWK

Sequences

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CDS sequence

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ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTC
CTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAAT
CAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCT
TAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGAAAATTTGTGCATCTTGAATTGTTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCA
ACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAG

mRNA sequence

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Protein sequence

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MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSN
QPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARKFVHLELLGIMELKTSAPYINSWLTNLTLRKRKLNSSLILYWF

Cucsat.G10718 (gene) of Cucumber (B10) v3 genome