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Cucsat.G10800 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10800
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionGeranylgeranyl transferase type-2 subunit beta
Genome locationctg1681:97222..99688
RNA-Seq ExpressionCucsat.G10800
SyntenyCucsat.G10800
Gene Ontology termsGO:0018344 - protein geranylgeranylation (biological process)
GO:0005968 - Rab-protein geranylgeranyltransferase complex (cellular component)
GO:0004663 - Rab geranylgeranyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645752.1 hypothetical protein Csa_020534 [Cucumis sativus]5.06e-7699.12Show/hide
Query:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
        MHTLPLTDFIMLLPFCHSRWVLSSLIMIDR HWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
Subjt:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR

Query:  IFLSKKIVSSKAID
        IFLSKKIVSSKAID
Subjt:  IFLSKKIVSSKAID

XP_022153059.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica charantia]1.37e-4486.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDRVHWINKE+LI+FILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_022153066.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia]1.15e-4486.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDRVHWINKE+LI+FILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_038887310.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]1.56e-4486.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMI RVHWINKE+LIKFILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_038887312.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X3 [Benincasa hispida]1.11e-4486.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMI RVHWINKE+LIKFILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

TrEMBL top hitse value%identityAlignment
A0A0A0K5L9 Uncharacterized protein1.05e-7297.37Show/hide
Query:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
        MHTLPLTDFIMLLPFCHSRWVLSSLIMIDR HWINKERLIKFILDSQ  DTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
Subjt:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR

Query:  IFLSKKIVSSKAID
        IFLSKKIVSSKAID
Subjt:  IFLSKKIVSSKAID

A0A2N9FHC9 Uncharacterized protein1.87e-4481.11Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSS+IMIDRVHWI+KE+L++FILD Q  DTENGGIS R DDAVDVYHT FG+AGLSLLEYPG KAIDPAYALPVDVVNRIF  K
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

A0A6J1DHW7 Geranylgeranyl transferase type-2 subunit beta6.63e-4586.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDRVHWINKE+LI+FILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

A0A6J1DJK5 Geranylgeranyl transferase type-2 subunit beta5.59e-4586.81Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDRVHWINKE+LI+FILD Q  DTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

A0A7J6FCH4 Geranylgeranyl transferase type-2 subunit beta3.56e-4484.44Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDRVHWINKE+L+KFILD Q  D ENGGIS R DDAVDVYHT FG+AGLSLLEYPG KAIDPAYALPVDVVNRIFL K
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

SwissProt top hitse value%identityAlignment
O93830 Geranylgeranyl transferase type-2 subunit beta2.3e-1751.72Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYP--GPKAIDPAYALPVDVVNR
        C+S WVLSSL ++ R +W++ + L  FIL    QD ENGG S R  +  DVYHTCF IAGLSL++Y   G K IDP Y +PV+V ++
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYP--GPKAIDPAYALPVDVVNR

P20133 Geranylgeranyl transferase type-2 subunit beta1.0e-1751.76Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
        C+S WVLSSL +I R+ WIN E+L +FIL  + QD + GGIS R ++ VDV+HT FG+AGLSL+ Y     IDP Y +P  V ++
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR

P46960 Geranylgeranyl transferase type-2 subunit beta2.7e-1844.32Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFL
        C+  W LS L +I ++ WI++ +LI F+L +  QD ++GG + R++DA DVYHTCF +AGLSLL++P  + +DP + LP++V  ++ L
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFL

Q84J75 Geranylgeranyl transferase type-2 subunit beta 11.1e-3272.34Show/hide
Query:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDRVHWI+K +L+KFILD   QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

Q9LHL5 Geranylgeranyl transferase type-2 subunit beta 21.4e-3071.11Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDRVHWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

Arabidopsis top hitse value%identityAlignment
AT3G12070.1 RAB geranylgeranyl transferase beta subunit 29.7e-3271.11Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDRVHWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 29.7e-3271.11Show/hide
Query:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDRVHWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 17.9e-3472.34Show/hide
Query:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDRVHWI+K +L+KFILD   QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT5G12210.2 RAB geranylgeranyl transferase beta subunit 17.9e-3472.34Show/hide
Query:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDRVHWI+K +L+KFILD   QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGTTCACTGGATTAATAAGGA
AAGACTCATTAAATTCATCTTAGATTCTCAGTTTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGAATAG
CTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATAGTATCATCC
AAAGCTATCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGTTCACTGGATTAATAAGGA
AAGACTCATTAAATTCATCTTAGATTCTCAGTTTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGAATAG
CTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATAGTATCATCC
AAAGCTATCGATTGA
Protein sequenceShow/hide protein sequence
MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRVHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSS
KAID