; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10843 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10843
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionExopolygalacturonase-like
Genome locationctg1681:828870..829869
RNA-Seq ExpressionCucsat.G10843
SyntenyCucsat.G10843
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059162.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.22e-14087.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

KAA0059167.1 exopolygalacturonase-like [Cucumis melo var. makuwa]2.06e-14587.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

TYK02527.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.09e-14087.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

XP_031744814.1 exopolygalacturonase-like [Cucumis sativus]2.33e-167100Show/hide
Query:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF
        MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF
Subjt:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF

Query:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
        AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
Subjt:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI

Query:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
Subjt:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

XP_031744817.1 exopolygalacturonase-like [Cucumis sativus]2.33e-167100Show/hide
Query:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF
        MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF
Subjt:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLF

Query:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
        AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
Subjt:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI

Query:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
Subjt:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

TrEMBL top hitse value%identityAlignment
A0A1S4E3K9 exopolygalacturonase-like6.41e-13180.42Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF YIDQL+LSG+GVFDGQGK+GW+KN+CHK KICTKLPMN++FS ITNSIVKDITSLDS  FHINLL CKNVT Q+VTI A ENSPNTDG+H+S SE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        NIL+++ISTG DCVSVG +NKQ+ ITNVTCGPG GIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

A0A5A7TSR0 Exopolygalacturonase-like1.90e-12780.52Show/hide
Query:  LLASTIEAQS---LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLM
        LLAST + QS   +FDVTRYGAKPNTDIT AL NAWK AC ST+ SK+LIPKGVY LSQS LKGPCKS  I++QVDGTL+AP  P GDGLV+  YID+L 
Subjt:  LLASTIEAQS---LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLM

Query:  LSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKIST
        LSGTGVFDGQGK GW+KNDCHKKKICTKLPM LKF+F+TNSIV+DITSLDSKNFHIN+LGCKN+TFQHVTISAPE+SPNTDGIHISSSEQI IL++KIST
Subjt:  LSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKIST

Query:  GDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        GDDCVSVGDSNKQ+TI +VTCGPGHGIS+GS
Subjt:  GDDCVSVGDSNKQVTITNVTCGPGHGISVGS

A0A5A7UTD3 Exopolygalacturonase-like5.90e-14187.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

A0A5D3BSV2 Exopolygalacturonase-like5.28e-14187.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

A0A5D3D708 Exopolygalacturonase-like9.98e-14687.08Show/hide
Query:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV
        MGLALLPF LLL  ASTI+ QS+FDVT YGAKPNTDITQALANAW EAC STTPS LLIPKGVYQLSQS LKGPCKSVPIQVQV+GTL+AP+H  GDGLV
Subjt:  MGLALLPFFLLL--ASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        LF+YIDQL+LSG+GVFDGQGK+GW+KN+CHKKKICTKLPMNLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI AP+ SPNTDGIHISSSE+I
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)5.1e-6456.94Show/hide
Query:  DITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN---GDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKK
        D TQAL  AWKEAC S +PS +L+PKG + +    L+GPCKS  I +Q+ GTLKAP  P+   G G +    ID L + G GVFDGQGK+ W +NDCHK 
Subjt:  DITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN---GDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKK

Query:  -KICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCG
          IC  L MNL+   +TNSI++D+T+LDSKNFH+N++GCKN+TF+   ISA E S NTDGIHI  S+ +NI++++I TGDDC+S+GD +K + ITN+TCG
Subjt:  -KICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCG

Query:  PGHGISVGS
        PGHGISVGS
Subjt:  PGHGISVGS

Q05967 Polygalacturonase7.6e-6855.13Show/hide
Query:  LLLASTIEAQS-LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN----GDGLVLFAYID
        L LA   E+Q+ +FD+T+YGA  N DI++AL NA+KEAC ST+PS ++IPKG + ++Q  L+GPCKS P+++Q+  TLKAP  P+    G+ L +   +D
Subjt:  LLLASTIEAQS-LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN----GDGLVLFAYID

Query:  QLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSK
        Q  +SG G+ DGQ  A W   +C + K C KLP NL F+ +TNS +KDIT+LDSK+FH+N+  CKN+TF    +SAP NSPNTDGIH+S S  +NI DS 
Subjt:  QLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSK

Query:  ISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         STGDDC+SVGD  +Q+ IT VTCGPGHGISVGS
Subjt:  ISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

Q39786 Polygalacturonase9.7e-6346.86Show/hide
Query:  LLPFFLLLASTIEAQSLFDVTRYGAKPN--TDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG---DGLVL
        +L    + AS +++ +   V ++GAK +  TD+++   +AWKEAC S TPS ++IPKG Y LS+  L+GPCK+ PI++ V GT++AP  P+       V 
Subjt:  LLPFFLLLASTIEAQSLFDVTRYGAKPN--TDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG---DGLVL

Query:  FAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQIN
        F  ++   + G G+FDGQG   ++KN C  ++  +KLP+N++F F+TN++++DITS DSK FHIN+  CKN+T + + I AP+ SPNTDGIH+  SE +N
Subjt:  FAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQIN

Query:  ILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        I+ S I TGDDC+S+GD  K + I  +TCGPGHGIS+GS
Subjt:  ILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

Q40312 Polygalacturonase7.9e-6551.64Show/hide
Query:  ALLPFFLLLASTIEAQS-LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN----GDGLV
        A++  FL +A    AQS + D++++G KPN+DI QAL +AW EAC STT +K++IP G YQL+   LKGPCK+ PI++QVDGT++AP  P+     +   
Subjt:  ALLPFFLLLASTIEAQS-LFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN----GDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDK----NDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISS
         F Y+D L LSG GVFDGQG   + K    +    K   +K+ MN  F+F+ NSIV+ +TS DSKNFH+ + GCKN+TF   TI+AP +SPNTDGIH+  
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDK----NDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISS

Query:  SEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        S  + IL++ I TGDDCVS+GD +KQ+T+  V CGPGHG+SVGS
Subjt:  SEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

Q6H9K0 Exopolygalacturonase (Fragment)6.1e-6553.15Show/hide
Query:  SLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN---GDGLVLFAYIDQLMLSGTGVFDG
        S+F+V  YGAK   DI+QA+  AWK AC S  PS +LIPKG Y + +  ++GPCK   I  Q+DG +KAP  P+    DG V F  ID L +SGTG  DG
Subjt:  SLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPN---GDGLVLFAYIDQLMLSGTGVFDG

Query:  QGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGD
        QG+  W KN+C K   C    MNL+F F+ +++V+DITSL+SK FHIN+L C+++TFQHVT++AP  S NTDGIH+  S+ + I ++KI+TGDDC+S+G 
Subjt:  QGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGD

Query:  SNKQVTITNVTCGPGHGISVGS
         ++ VTIT V CGPGHGIS+GS
Subjt:  SNKQVTITNVTCGPGHGISVGS

Arabidopsis top hitse value%identityAlignment
AT2G15460.1 Pectin lyase-like superfamily protein7.1e-5345.38Show/hide
Query:  FFLLLASTIEAQ-SLFDVTRYGAKPN--TDITQALANAWKEACMSTT-PSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG---DGLVLF
        FF+++AS    +  +F+V R+GAKP+  TD   A  + W  AC   +  SK+ +PKG + L      GPCK+ PI+  +DGTL AP +P+    D  + F
Subjt:  FFLLLASTIEAQ-SLFDVTRYGAKPN--TDITQALANAWKEACMSTT-PSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG---DGLVLF

Query:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
         YI+ L +SG+G  DGQGK  W  NDCH    C KL M + F+F+ NS +KDITSL+SK  H N     +     VTI+AP +SPNTDGI + S   I I
Subjt:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI

Query:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         D+ I TGDDC+++      + I+NV CGPGHGISVGS
Subjt:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

AT3G07820.1 Pectin lyase-like superfamily protein4.9e-6251.83Show/hide
Query:  DVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLH--PNGDGLVLFAYIDQLMLSGTGVFDGQGKA
        +V   G+   +DITQAL  A+  AC S++PSK++IPKG ++L +  ++GPCK+ PI+V + GT+KA  +     +  V+F  ID   L+G G FDG+G A
Subjt:  DVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLH--PNGDGLVLFAYIDQLMLSGTGVFDGQGKA

Query:  GWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQ
         W  N+CHK   C KLP++++F FI NS ++DI+S+D+KNFHIN+LG KN+T  ++ I APE+SPNTDGIH+  S+ + IL+S ISTGDDC+SVGD  K 
Subjt:  GWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQ

Query:  VTITNVTCGPGHGISVGS
        + +  VTCGPGHGISVGS
Subjt:  VTITNVTCGPGHGISVGS

AT3G07830.1 Pectin lyase-like superfamily protein2.1e-6050.23Show/hide
Query:  DVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKA---PLHPNGDGLVLFAYIDQLMLSGTGVFDGQGK
        +V R  + P +DITQAL  A+  AC S TP K++IPKG ++L +  + GPCKS P+++ + GT+ A    +H   +  V+F  +D   L+G G FDG+G 
Subjt:  DVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKA---PLHPNGDGLVLFAYIDQLMLSGTGVFDGQGK

Query:  AGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNK
        A W  N+CHK   C KLP++++F F+TN+ ++DI+S+D+KNFHIN++G KN+TF +V I AP  SPNTDGIH+  S  ++I++S+ISTGDDCVSVGD   
Subjt:  AGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNK

Query:  QVTITNVTCGPGHGISVGS
         + + NV CGPGHGISVGS
Subjt:  QVTITNVTCGPGHGISVGS

AT3G07840.1 Pectin lyase-like superfamily protein2.7e-6047.08Show/hide
Query:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKA--PLHPNGDGLV
        +G++ + F + L        +F+V   G  P +DITQAL  A+  AC + T SK++I KG ++L +  + GPCK+ P+++ + GTLKA        +  V
Subjt:  MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKA--PLHPNGDGLV

Query:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
        +F  I+   L+G G+FDG+G A W  N+CHK   C KLP++++F F+ N+ ++DI+S+D+KNFHIN+LG KN+TF +V + AP  SPNTDGIH+  SE +
Subjt:  LFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI

Query:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
         IL+SKI+TGDDC+SVGD  K + + NV CGPGHGISVGS
Subjt:  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS

AT5G48140.1 Pectin lyase-like superfamily protein7.9e-6049.16Show/hide
Query:  GLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG-DGLVLF
        G++    F LL  +  A+ +F++    + P +DIT AL  A+ EAC   T S ++IPKG Y+L +  + GPCK+ PI++ + GT+KA  + NG +  V F
Subjt:  GLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNG-DGLVLF

Query:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI
          I+   L+G GVFDG+G A W  N+CHK   C KLP++++F F+T++ ++ ITSLD+K+FHIN++G KNVTF+ V I AP  SPNTDGIH+  S+ I I
Subjt:  AYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINI

Query:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS
        ++S ISTGDDCVSVGD  K + +  VTCGPGHGIS+GS
Subjt:  LDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGGCATTACTACCTTTCTTTTTATTGTTGGCATCTACTATTGAAGCCCAATCCCTTTTTGATGTTACAAGATATGGTGCCAAACCTAATACAGATATTACTCA
GGCCTTAGCAAATGCATGGAAGGAAGCATGTATGTCCACAACTCCTAGTAAATTGTTGATTCCAAAAGGAGTATACCAATTAAGTCAATCTTATCTTAAAGGACCTTGCA
AGAGTGTTCCTATTCAAGTCCAAGTCGACGGAACACTAAAAGCTCCTCTCCATCCAAATGGAGATGGGTTGGTTCTTTTTGCATACATTGATCAACTAATGTTATCAGGC
ACGGGAGTTTTTGATGGTCAAGGAAAAGCAGGTTGGGATAAGAATGATTGCCACAAAAAGAAGATATGTACCAAACTTCCCATGAATTTGAAGTTCAGTTTCATCACCAA
TTCAATTGTGAAGGACATAACTTCCTTGGACAGTAAAAATTTCCACATCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAACACGTGACAATCAGTGCACCAGAGAATA
GTCCCAACACGGATGGAATTCACATAAGTAGCTCTGAACAGATAAACATTCTCGATTCAAAAATCTCAACTGGAGATGATTGTGTGTCTGTTGGAGATAGCAACAAGCAA
GTAACTATTACTAATGTAACTTGCGGACCAGGACATGGCATTAGCGTAGGAAGC
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGGCATTACTACCTTTCTTTTTATTGTTGGCATCTACTATTGAAGCCCAATCCCTTTTTGATGTTACAAGATATGGTGCCAAACCTAATACAGATATTACTCA
GGCCTTAGCAAATGCATGGAAGGAAGCATGTATGTCCACAACTCCTAGTAAATTGTTGATTCCAAAAGGAGTATACCAATTAAGTCAATCTTATCTTAAAGGACCTTGCA
AGAGTGTTCCTATTCAAGTCCAAGTCGACGGAACACTAAAAGCTCCTCTCCATCCAAATGGAGATGGGTTGGTTCTTTTTGCATACATTGATCAACTAATGTTATCAGGC
ACGGGAGTTTTTGATGGTCAAGGAAAAGCAGGTTGGGATAAGAATGATTGCCACAAAAAGAAGATATGTACCAAACTTCCCATGAATTTGAAGTTCAGTTTCATCACCAA
TTCAATTGTGAAGGACATAACTTCCTTGGACAGTAAAAATTTCCACATCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAACACGTGACAATCAGTGCACCAGAGAATA
GTCCCAACACGGATGGAATTCACATAAGTAGCTCTGAACAGATAAACATTCTCGATTCAAAAATCTCAACTGGAGATGATTGTGTGTCTGTTGGAGATAGCAACAAGCAA
GTAACTATTACTAATGTAACTTGCGGACCAGGACATGGCATTAGCGTAGGAAGC
Protein sequenceShow/hide protein sequence
MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKGVYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSG
TGVFDGQGKAGWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQ
VTITNVTCGPGHGISVGS