; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G10870 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G10870
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg1681:1197768..1203642
RNA-Seq ExpressionCucsat.G10870
SyntenyCucsat.G10870
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030121 - AP-1 adaptor complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0035615 - clathrin adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.69e-18578.69Show/hide
Query:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D
        MGA Q  LQSRL+VSKILSSTIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD  FS SEP ++PPQRR PPD REARRVP+  G V+A Y  D
Subjt:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D

Query:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV
        NRNQRFNRHSEGSSSRF NEG  S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA  SESM  KQ S+PQ PPEADEIF KMKETGLIPNAV
Subjt:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV

Query:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN
        AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKFDEAIRIFRKMQ+NGI PNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PN
Subjt:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN

Query:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LRE LNKRAPFSP IW++ FG +   FF
Subjt:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

XP_004144563.1 pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus]4.42e-256100Show/hide
Query:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
        MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
Subjt:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF

Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
        NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG

Query:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
Subjt:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

XP_008462006.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo]2.13e-23192.22Show/hide
Query:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
        M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AFS+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRF
Subjt:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF

Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
        NRHSEGSSSRFTNEGSTS QRSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ QRPP ADEIF KMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG

Query:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LID LC+EKGVDEAH+VVETFKQKGFLIDEKALRE LNKRAPFSPDIWKVFFGN+K PFF
Subjt:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]1.90e-18478.69Show/hide
Query:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D
        MGA Q  LQSRL+VSKIL STIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD  FS SEP ++PPQRR PPD REARRVP+  G V+A Y  D
Subjt:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D

Query:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV
        NRNQRFNRH EGS SRF NEG  S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESM  KQ S+PQ PPEADEIF KMKETGLIPNAV
Subjt:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV

Query:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN
        AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE  DEAIRIFRKMQ+NGI PNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PN
Subjt:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN

Query:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALRE LNKRAPFSP IW++ FG +   FF
Subjt:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

XP_038888880.1 pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida]5.28e-19182.42Show/hide
Query:  AFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPP-DHREARRVPRGG--VTASY--DNRN
        AFQ QSRL+V KILSSTIRKWE DFPLLH+ LR P+FSL PAQSR FASNS+DDD AFS SEP  +PPQRR PP DHREARRVP     V+A +  DNRN
Subjt:  AFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPP-DHREARRVPRGG--VTASY--DNRN

Query:  QRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAML
        QRFNR SEGSSSRF NE S S QR+ESL+QKDFSFLE+FKLNTDNQSS  EKTEE SSSA +SESM EKQ S+PQRPPEADEIF KMKETGLIPNAVAML
Subjt:  QRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAML

Query:  DGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTT
        DGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQ+NGIPPNAFSFGVLIQGLYKCKKL+DAVAFC EMLESGH PNL T
Subjt:  DGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTT

Query:  FVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNR-KPPFF
        FVGLID LCNEKGVDEAHSVVET KQKGFLI+EKALRE+LNKRAPFSP IW+V FG + K  FF
Subjt:  FVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNR-KPPFF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C0 Uncharacterized protein2.14e-256100Show/hide
Query:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
        MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
Subjt:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF

Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
        NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG

Query:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
Subjt:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381501.03e-23192.22Show/hide
Query:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
        M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AFS+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRF
Subjt:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF

Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
        NRHSEGSSSRFTNEGSTS QRSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ QRPP ADEIF KMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG

Query:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LID LC+EKGVDEAH+VVETFKQKGFLIDEKALRE LNKRAPFSPDIWKVFFGN+K PFF
Subjt:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

A0A5D3D5J5 Pentatricopeptide repeat-containing protein1.03e-23192.22Show/hide
Query:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF
        M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AFS+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRF
Subjt:  MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRF

Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL
        NRHSEGSSSRFTNEGSTS QRSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ QRPP ADEIF KMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG

Query:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LID LC+EKGVDEAH+VVETFKQKGFLIDEKALRE LNKRAPFSPDIWKVFFGN+K PFF
Subjt:  LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like5.31e-18477.87Show/hide
Query:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D
        MGA Q  LQSRL+VSKILSSTIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD  FS SEP ++PPQRR PPD REARRVP+  G V+A Y  D
Subjt:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D

Query:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV
        NRNQRFNRHSEGSSSRF N+G  S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA +SESM  KQ S+PQ PPEADEIF KMKETGLIPNAV
Subjt:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV

Query:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN
        AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQ+NGI PNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PN
Subjt:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN

Query:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LR+ LNKRAPFSP IW++ FG +   FF
Subjt:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like9.22e-18578.69Show/hide
Query:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D
        MGA Q  LQSRL+VSKIL STIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD  FS SEP ++PPQRR PPD REARRVP+  G V+A Y  D
Subjt:  MGAFQ--LQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--D

Query:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV
        NRNQRFNRH EGS SRF NEG  S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESM  KQ S+PQ PPEADEIF KMKETGLIPNAV
Subjt:  NRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIPNAV

Query:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN
        AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE  DEAIRIFRKMQ+NGI PNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PN
Subjt:  AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN

Query:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF
        LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALRE LNKRAPFSP IW++ FG +   FF
Subjt:  LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial2.1e-2235.62Show/hide
Query:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+     EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK

Query:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV
           + DA    N M+++G  PN+ T+  LID LC E  +D A+ ++
Subjt:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial7.9e-2229.8Show/hide
Query:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK
        EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA++ D+ +R+FR++   G+ PN  ++  L+ G  +
Subjt:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK

Query:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQ
          KL+ A     EM+  G  P++ T+  L+D LC+   +++A  + E  ++
Subjt:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQ

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial1.0e-2135.53Show/hide
Query:  ADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKC
        A E+  KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A ++D+  ++ R M    I PN  +F VLI    K 
Subjt:  ADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKC

Query:  KKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG
         KL +A     EM++ G  PN  T+  LID  C E  ++EA  +V+    KG
Subjt:  KKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG

Q9M9X9 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial3.6e-2233.12Show/hide
Query:  PEADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLY
        P+ D  F +  +    PN V   A+LDG CK   ++EA KL   +  +G  P  ++Y A++DG CK  K DEA  +  +M  +G P   +++  LI   +
Subjt:  PEADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLY

Query:  KCKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG
        K K+ D A    ++MLE+   PN+  +  +ID LC     DEA+ +++  ++KG
Subjt:  KCKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381502.9e-7256.98Show/hide
Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG
        N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+                 EP  PPE +DEIF KMKE GLIPNAVAMLDG
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG

Query:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV
        LCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDAVAFC+EMLESGH PN+ TFV
Subjt:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV

Query:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP
         L+DALC  KGV++A S ++T  QKGF ++ KA++E ++KRAPF    W+  F  +KP
Subjt:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.5e-2335.62Show/hide
Query:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+     EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK

Query:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV
           + DA    N M+++G  PN+ T+  LID LC E  +D A+ ++
Subjt:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein1.5e-2335.62Show/hide
Query:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+     EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFGKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYK

Query:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV
           + DA    N M+++G  PN+ T+  LID LC E  +D A+ ++
Subjt:  CKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVV

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-7356.98Show/hide
Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG
        N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+                 EP  PPE +DEIF KMKE GLIPNAVAMLDG
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG

Query:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV
        LCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDAVAFC+EMLESGH PN+ TFV
Subjt:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV

Query:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP
         L+DALC  KGV++A S ++T  QKGF ++ KA++E ++KRAPF    W+  F  +KP
Subjt:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein2.0e-7356.98Show/hide
Query:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG
        N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+                 EP  PPE +DEIF KMKE GLIPNAVAMLDG
Subjt:  NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPE-ADEIFGKMKETGLIPNAVAMLDG

Query:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV
        LCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDAVAFC+EMLESGH PN+ TFV
Subjt:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFV

Query:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP
         L+DALC  KGV++A S ++T  QKGF ++ KA++E ++KRAPF    W+  F  +KP
Subjt:  GLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKP

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein7.1e-2631.52Show/hide
Query:  SEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSES
        S  I+    R+ PP+ R  R   R     S  N N  F     G  +R  +  +       + S  D    E+    T+ Q +   K +E     P    
Subjt:  SEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSES

Query:  MLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFS
          +    EP+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +  E +++F +M  +G+ PNA++
Subjt:  MLEKQQSEPQRPPEADEIFGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFS

Query:  FGVLIQGLYKCKKL-DDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVL
        + VLI+GL    K   DA  +  EM+ +G  PN  T+  + +A   E   + A  +++  K KGF+ DEKA+RE L
Subjt:  FGVLIQGLYKCKKL-DDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCCCTCTCCTCCCAACCCCATTTGAACTTTCATCAAATACCCTCTCGTACCAATATTTCTTCATAATTTCTTGGTTTAAATTTCTCATGGGGGCGTTTCAACTTCAATC
TCGTCTTCAAGTTTCGAAGATTTTGTCTTCAACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAACCCATTGCGAACGCCGGATTTCTCACTCTACCCTGCGC
AATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATCATGCCTTCTCGGATTCCGAGCCGATAAACACTCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCT
CGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTC
GCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAAACTGAGGAGAACTCTT
CTTCTGCTCCGGTGTCTGAATCAATGCTGGAGAAGCAGCAGTCGGAACCGCAGCGTCCTCCAGAAGCTGATGAGATATTCGGGAAAATGAAGGAGACTGGTTTAATTCCC
AATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTA
CACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGTTTGATGAAGCGATTAGGATTTTCAGGAAAATGCAGCATAACGGTATTCCTCCAAATGCCTTCAGTTTTGGTG
TCTTGATTCAGGGATTGTACAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTA
ATTGATGCGTTATGCAATGAGAAGGGTGTGGATGAAGCTCATAGTGTTGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAAGTTTTGAA
TAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAGAAAACCCCCATTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCCTCTCCTCCCAACCCCATTTGAACTTTCATCAAATACCCTCTCGTACCAATATTTCTTCATAATTTCTTGGTTTAAATTTCTCATGGGGGCGTTTCAACTTCAATC
TCGTCTTCAAGTTTCGAAGATTTTGTCTTCAACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAACCCATTGCGAACGCCGGATTTCTCACTCTACCCTGCGC
AATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATCATGCCTTCTCGGATTCCGAGCCGATAAACACTCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCT
CGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTC
GCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAAACTGAGGAGAACTCTT
CTTCTGCTCCGGTGTCTGAATCAATGCTGGAGAAGCAGCAGTCGGAACCGCAGCGTCCTCCAGAAGCTGATGAGATATTCGGGAAAATGAAGGAGACTGGTTTAATTCCC
AATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTA
CACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGTTTGATGAAGCGATTAGGATTTTCAGGAAAATGCAGCATAACGGTATTCCTCCAAATGCCTTCAGTTTTGGTG
TCTTGATTCAGGGATTGTACAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTA
ATTGATGCGTTATGCAATGAGAAGGGTGTGGATGAAGCTCATAGTGTTGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAAGTTTTGAA
TAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAGAAAACCCCCATTTTTCTGA
Protein sequenceShow/hide protein sequence
SPLLPTPFELSSNTLSYQYFFIISWFKFLMGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREA
RRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIFGKMKETGLIP
NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVGL
IDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF