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Cucsat.G11094 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11094
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptioncentromere protein X isoform X2
Genome locationctg1740:287317..296660
RNA-Seq ExpressionCucsat.G11094
SyntenyCucsat.G11094
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057803.1 centromere protein X isoform X2 [Cucumis melo var. makuwa]6.94e-5994.29Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLLD
          L +
Subjt:  QLLLD
TYJ98487.1 centromere protein X isoform X2 [Cucumis melo var. makuwa]8.25e-6095.19Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLL
        Q+++
Subjt:  QLLL
XP_008464489.1 PREDICTED: centromere protein X isoform X2 [Cucumis melo]2.11e-6398.11Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF
XP_031736273.1 protein MHF2 homolog isoform X1 [Cucumis sativus]3.91e-9892.22Show/hide
Query:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE-------------
        KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE             
Subjt:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE-------------

Query:  VDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
        VDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Subjt:  VDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
XP_031736274.1 protein MHF2 homolog isoform X2 [Cucumis sativus]5.49e-102100Show/hide
Query:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP
        KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP
Subjt:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP

Query:  MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
        MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Subjt:  MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein2.66e-102100Show/hide
Query:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP
        KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP
Subjt:  KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRP

Query:  MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
        MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Subjt:  MSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
A0A1S3CLJ8 centromere protein X isoform X17.91e-5993.46Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFI-SEAVQRAATIAEAEGISRIEPTHLERVL
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLV   I +EAVQRAATIAEAEGI RIEPTHLERVL
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFI-SEAVQRAATIAEAEGISRIEPTHLERVL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF
A0A1S3CLK5 centromere protein X isoform X21.02e-6398.11Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF
A0A5A7UPL0 Centromere protein X isoform X23.36e-5994.29Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLLD
          L +
Subjt:  QLLLD
A0A5D3BH88 Centromere protein X isoform X23.99e-6095.19Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLP

Query:  QLLL
        Q+++
Subjt:  QLLL
SwissProt top hitse value%identityAlignment
P0DJH7 Centromere protein X3.2e-0649.02Show/hide
Query:  NANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
        N +AL L ++L+++F+ EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Subjt:  NANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Q2NKU0 Centromere protein X2.0e-0543.1Show/hide
Query:  KSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
        K +    + +AL+L ++L++IF+ EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Subjt:  KSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Q8L7N3 Protein MHF2 homolog5.2e-2563.73Show/hide
Query:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL
        F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R  SANANALKLS +L++ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLL
Subjt:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL

Query:  DF
        DF
Subjt:  DF
Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein3.7e-2663.73Show/hide
Query:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL
        F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R  SANANALKLS +L++ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLL
Subjt:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL

Query:  DF
        DF
Subjt:  DF
AT1G78790.2 unknown protein7.0e-1751.96Show/hide
Query:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL
        F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R                    SEAVQRAA IAEAEG+ +IE THLER+LPQLLL
Subjt:  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL

Query:  DF
        DF
Subjt:  DF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGT
CTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGC
GCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTG
AGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCT
TCCGCAGTTACTACTGGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGT
CTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGC
GCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTG
AGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCT
TCCGCAGTTACTACTGGATTTTTAA
Protein sequenceShow/hide protein sequence
KDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKL
SSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF