CuGenDBv2

Gene ID	Cucsat.G11160
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	protein transport protein SEC24
Genome location	ctg1780:256682..257517
RNA-Seq Expression	Cucsat.G11160
Synteny	Cucsat.G11160
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0007029 - endoplasmic reticulum organization (biological process) GO:0007030 - Golgi organization (biological process) GO:0008361 - regulation of cell size (biological process) GO:0010584 - pollen exine formation (biological process) GO:0032876 - negative regulation of DNA endoreduplication (biological process) GO:0048232 - male gamete generation (biological process) GO:0048658 - anther wall tapetum development (biological process) GO:0080119 - ER body organization (biological process) GO:0090110 - COPII-coated vesicle cargo loading (biological process) GO:0030127 - COPII vesicle coat (cellular component) GO:0070971 - endoplasmic reticulum exit site (cellular component) GO:0000149 - SNARE binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006895 - Zinc finger, Sec23/Sec24-type IPR036174 - Zinc finger, Sec23/Sec24-type superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035477.1 protein transport protein SEC24 [Cucumis melo var. makuwa]

1.49e-86

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

KAG6573625.1 hypothetical protein SDJN03_27512, partial [Cucurbita argyrosperma subsp. sororia]

4.08e-82

98.37

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQ+RPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

TYK31047.1 protein transport protein sec24 [Cucumis melo var. makuwa]

1.96e-82

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

XP_008461390.1 PREDICTED: protein transport protein SEC24 [Cucumis melo]

1.48e-82

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

XP_022967059.1 protein transport protein sec24 [Cucurbita maxima]

4.08e-82

98.37

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQ+RPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSP1 Uncharacterized protein

5.24e-85

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSG EAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

A0A1S3CEA2 protein transport protein SEC24

7.15e-83

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

A0A5A7T1K4 Protein transport protein SEC24

7.19e-87

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

A0A5D3E4P3 Protein transport protein sec24

9.48e-83

99.19

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQSRPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

A0A6J1HVN4 protein transport protein sec24

1.98e-82

98.37

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+DADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLELPDEGSGGEAMQ+RPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

SwissProt top hits

e value

%identity

Alignment

Q9USS7 Uncharacterized protein C4.03c

6.2e-05

29.82

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Query:  VRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRP-PAYGSDAHLLPRCEHCWAYFNSYCD--LEHWAWTCALCGTLN-----GLSSKAIARFSNPE
        V+ T    P   D    SG+P G+ V PFA    +  P P   +     PRC+ C  Y N +    +    WTC LCG+ N     G +    ++    E
Subjt:  VRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRP-PAYGSDAHLLPRCEHCWAYFNSYCD--LEHWAWTCALCGTLN-----GLSSKAIARFSNPE

Query:  SCPEMMSSFIDLEL
        S PE+    ID ++
Subjt:  SCPEMMSSFIDLEL

Arabidopsis top hits

e value

%identity

Alignment

AT2G27460.1 sec23/sec24 transport family protein

4.5e-51

73.17

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Query:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM
        MAVRATVSRFP+D+DAQE SGLPWG++VTPFA+KDENG  PA GS+ HLLPRCE+C+AYFN+YC+L+ WAW C+LCGTLNGL S AIAR+SNP S PEM 
Subjt:  MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMM

Query:  SSFIDLELPDEGSGGEAMQSRPV
        SSFIDLE+P +GS  E  Q+RPV
Subjt:  SSFIDLELPDEGSGGEAMQSRPV

Sequences

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CDS sequence

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ATGGCTGTTAGAGCTACAGTCTCTCGTTTCCCAGTTGACGCTGATGCTCAGGAGAACTCTGGCCTTCCTTGGGGAGTTTCCGTCACCCCCTTCGCCTCCAAGGATGAGAA
TGGCCGTCCTCCCGCCTACGGATCCGATGCCCACCTCCTTCCCCGTTGCGAGCATTGCTGGGCTTACTTCAACTCCTATTGTGACCTTGAACATTGGGCATGGACCTGCG
CTCTCTGCGGTACCCTCAATGGCCTCTCTTCCAAGGCGATTGCTCGATTCTCCAATCCTGAATCCTGCCCCGAGATGATGTCCTCGTTCATAGATCTCGAGCTCCCTGAT
GAAGGCTCCGGAGGAGAAGCAATGCAATCTCGTCCAGTA

mRNA sequence

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Protein sequence

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MAVRATVSRFPVDADAQENSGLPWGVSVTPFASKDENGRPPAYGSDAHLLPRCEHCWAYFNSYCDLEHWAWTCALCGTLNGLSSKAIARFSNPESCPEMMSSFIDLELPD
EGSGGEAMQSRPV

Cucsat.G11160 (gene) of Cucumber (B10) v3 genome