| GenBank top hits | e value | %identity | Alignment |
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| KAA0043630.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa] | 5.61e-54 | 55.84 | Show/hide |
Query: AKRRSCRISKPPSYLQEFHCGLLLNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
A RRS R PPSYL++FHC L ++ FPL+KY+SY+ +QNH+ + L ++S YEP YYHQA+ H +W++AM +E+ AME+ NTWTIV LPK+
Subjt: AKRRSCRISKPPSYLQEFHCGLLLNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
Query: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
H++G KWVYK+K+K G+++RYKARL+AKGY QQEG+D+ +TFS VAK+VTVK+
Subjt: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| KAE9586232.1 putative RNA-directed DNA polymerase [Lupinus albus] | 2.98e-54 | 50.26 | Show/hide |
Query: SQTHQNAENTTTSPPHNPA-KRRSCRISKPPSYLQEFHCGLLL--NQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMN
SQT Q N + PP N R S R KPP+YLQ++HC LL + PK+ + ++SYD LS HR F+L+IS+ P +YH+ + H W+ A+
Subjt: SQTHQNAENTTTSPPHNPA-KRRSCRISKPPSYLQEFHCGLLL--NQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMN
Query: DELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKVSV-------WLRHQLTVPCT
+EL A+E+NNTWT+ LPKD+H+I CKWV+KIKHKA G+IERYKARLVAKGY Q EG+DY++TFSPV K+ T++V + W HQL V T
Subjt: DELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKVSV-------WLRHQLTVPCT
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| TYK16758.1 Copia protein [Cucumis melo var. makuwa] | 2.57e-55 | 63.4 | Show/hide |
Query: RRSCRISKPPSYLQEFHCGLLLNQPPLS--NPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
R+S RI+KPPSYLQ +HC LL Q P + + K+P+ +Y+SY LS +++ L +S+ E +YH+AV WR+AM EL AME N TW+IVPLPK +
Subjt: RRSCRISKPPSYLQEFHCGLLLNQPPLS--NPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
Query: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK
+SIGC+WVYKIKHK DGSIERYKARLVAKGYTQQEGLDY ETFSPVAK+VTVK
Subjt: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK
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| XP_022147774.1 uncharacterized protein LOC111016631 isoform X1 [Momordica charantia] | 1.31e-58 | 63.16 | Show/hide |
Query: RSCRISKPPSYLQEFHCGLLLNQPPLSNP-KFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHS
RS R + PSYL+++HC L + S+P K+ LQ+Y+SYDKLS ++ F L +S+ +EP +YH AV++ HWR AMN EL+AME NNTW++V LP HS
Subjt: RSCRISKPPSYLQEFHCGLLLNQPPLSNP-KFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHS
Query: IGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
IGCKWVYK+KH DGSIERYKARLVAKGYTQQEGLDY+ETFS VAKLV VK+
Subjt: IGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia] | 3.36e-60 | 65.36 | Show/hide |
Query: RRSCRISKPPSYLQEFHCGLL-LNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQH
RRS R+++ PSYL+++HCGL+ S+ +PLQKY+ Y+ LS +++ F L++S YEPQ+YHQAV HWR+AM EL AME N+TW++VPLP + H
Subjt: RRSCRISKPPSYLQEFHCGLL-LNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQH
Query: SIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
SIGCKW+YK+KHK+DGSIERYKARLVAKGYTQQEGLDY+ETFSPVAKLVTVKV
Subjt: SIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TK43 Reverse transcriptase, RNA-dependent DNA polymerase | 2.72e-54 | 55.84 | Show/hide |
Query: AKRRSCRISKPPSYLQEFHCGLLLNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
A RRS R PPSYL++FHC L ++ FPL+KY+SY+ +QNH+ + L ++S YEP YYHQA+ H +W++AM +E+ AME+ NTWTIV LPK+
Subjt: AKRRSCRISKPPSYLQEFHCGLLLNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
Query: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
H++G KWVYK+K+K G+++RYKARL+AKGY QQEG+D+ +TFS VAK+VTVK+
Subjt: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| A0A5D3CZP1 Copia protein | 1.25e-55 | 63.4 | Show/hide |
Query: RRSCRISKPPSYLQEFHCGLLLNQPPLS--NPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
R+S RI+KPPSYLQ +HC LL Q P + + K+P+ +Y+SY LS +++ L +S+ E +YH+AV WR+AM EL AME N TW+IVPLPK +
Subjt: RRSCRISKPPSYLQEFHCGLLLNQPPLS--NPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQ
Query: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK
+SIGC+WVYKIKHK DGSIERYKARLVAKGYTQQEGLDY ETFSPVAK+VTVK
Subjt: HSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK
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| A0A6A4N866 Putative RNA-directed DNA polymerase | 1.44e-54 | 50.26 | Show/hide |
Query: SQTHQNAENTTTSPPHNPA-KRRSCRISKPPSYLQEFHCGLLL--NQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMN
SQT Q N + PP N R S R KPP+YLQ++HC LL + PK+ + ++SYD LS HR F+L+IS+ P +YH+ + H W+ A+
Subjt: SQTHQNAENTTTSPPHNPA-KRRSCRISKPPSYLQEFHCGLLL--NQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMN
Query: DELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKVSV-------WLRHQLTVPCT
+EL A+E+NNTWT+ LPKD+H+I CKWV+KIKHKA G+IERYKARLVAKGY Q EG+DY++TFSPV K+ T++V + W HQL V T
Subjt: DELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKVSV-------WLRHQLTVPCT
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| A0A6J1D203 uncharacterized protein LOC111016631 isoform X1 | 6.32e-59 | 63.16 | Show/hide |
Query: RSCRISKPPSYLQEFHCGLLLNQPPLSNP-KFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHS
RS R + PSYL+++HC L + S+P K+ LQ+Y+SYDKLS ++ F L +S+ +EP +YH AV++ HWR AMN EL+AME NNTW++V LP HS
Subjt: RSCRISKPPSYLQEFHCGLLLNQPPLSNP-KFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHS
Query: IGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
IGCKWVYK+KH DGSIERYKARLVAKGYTQQEGLDY+ETFS VAKLV VK+
Subjt: IGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| A0A6J1DNP7 uncharacterized protein LOC111022065 | 1.63e-60 | 65.36 | Show/hide |
Query: RRSCRISKPPSYLQEFHCGLL-LNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQH
RRS R+++ PSYL+++HCGL+ S+ +PLQKY+ Y+ LS +++ F L++S YEPQ+YHQAV HWR+AM EL AME N+TW++VPLP + H
Subjt: RRSCRISKPPSYLQEFHCGLL-LNQPPLSNPKFPLQKYMSYDKLSQNHRHFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQH
Query: SIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
SIGCKW+YK+KHK+DGSIERYKARLVAKGYTQQEGLDY+ETFSPVAKLVTVKV
Subjt: SIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVKV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.6e-15 | 41.94 | Show/hide |
Query: WRQAMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK--VSVWLRHQLTV
W +A+N EL A + NNTWTI P++++ + +WV+ +K+ G+ RYKARLVA+G+TQ+ +DY ETF+PVA++ + + +S+ +++ L V
Subjt: WRQAMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTVK--VSVWLRHQLTV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-16 | 35.77 | Show/hide |
Query: ISSTYEPQYYHQAVTHLHWRQ---AMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTV
IS EP+ + ++H Q AM +E+ ++++N T+ +V LPK + + CKWV+K+K D + RYKARLV KG+ Q++G+D+ E FSPV K+ ++
Subjt: ISSTYEPQYYHQAVTHLHWRQ---AMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKLVTV
Query: KVSVWLRHQLTVPCTRLTLLIIF
+ + L L + +L + F
Subjt: KVSVWLRHQLTVPCTRLTLLIIF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-21 | 44.35 | Show/hide |
Query: FALTISSTY--EPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKL
++LTI++T EP+ A+ W QAM +EL A+ +N TW +VP P +Q+ +GCKWV+K K +DG+++R KARLVAKG+ Q+EG+ ++ET+SPV +
Subjt: FALTISSTY--EPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSIGCKWVYKIKHKADGSIERYKARLVAKGYTQQEGLDYMETFSPVAKL
Query: VTVKVSVWLRHQLTV
T++ + + QL V
Subjt: VTVKVSVWLRHQLTV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.9e-19 | 31.86 | Show/hide |
Query: SSPDDDIPNNTEFNSIEETIDESETQQNVDSQTHQNAENTTTSPPHNPAKRRSC---RISKPPSYLQEFHCGLLLNQPP--LSNPKFPLQKYMSYDKLSQ
SSP+ P N + T ++TQ S + + N T P A+ S S PS PP L +P PL + ++ + +
Subjt: SSPDDDIPNNTEFNSIEETIDESETQQNVDSQTHQNAENTTTSPPHNPAKRRSC---RISKPPSYLQEFHCGLLLNQPP--LSNPKFPLQKYMSYDKLSQ
Query: NHRH------------------FALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSI-GCKWVYKIKHKADGSIERYKARLVA
+ H A+++++ EP+ QA+ WR AM E+ A N+TW +VP P +I GC+W++ K+ +DGS+ RYKARLVA
Subjt: NHRH------------------FALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSI-GCKWVYKIKHKADGSIERYKARLVA
Query: KGYTQQEGLDYMETFSPVAKLVTVKV
KGY Q+ GLDY ETFSPV K ++++
Subjt: KGYTQQEGLDYMETFSPVAKLVTVKV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-20 | 32.6 | Show/hide |
Query: SQPIYSQ-QHDQPPVISSPDDDIPNNTEFNSIEETIDESETQQNVDSQTHQNAENTTTSPPHNPAKRRSCRISKPPSYLQEFHCGLLLNQPPL--SNPKF
+QP +Q + P++++P+ PN+ NS + S Q+ S H +T+ S P++P+ + PP +L PP+ N +
Subjt: SQPIYSQ-QHDQPPVISSPDDDIPNNTEFNSIEETIDESETQQNVDSQTHQNAENTTTSPPHNPAKRRSCRISKPPSYLQEFHCGLLLNQPPL--SNPKF
Query: PLQKYMSYDKLSQNHR------HFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSI-GCKWVYKIKHKADGSIERYKARLV
P+ + + R +A ++++ EP+ QA+ WRQAM E+ A N+TW +VP P +I GC+W++ K +DGS+ RYKARLV
Subjt: PLQKYMSYDKLSQNHR------HFALTISSTYEPQYYHQAVTHLHWRQAMNDELIAMEQNNTWTIVPLPKDQHSI-GCKWVYKIKHKADGSIERYKARLV
Query: AKGYTQQEGLDYMETFSPVAKLVTVKV
AKGY Q+ GLDY ETFSPV K ++++
Subjt: AKGYTQQEGLDYMETFSPVAKLVTVKV
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