| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0064637.1 small nuclear ribonucleoprotein SmD3a-like [Cucumis melo var. makuwa] | 4.96e-85 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| XP_004145538.1 small nuclear ribonucleoprotein SmD3a [Cucumis sativus] | 9.55e-85 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKV FMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| XP_008452950.1 PREDICTED: small nuclear ribonucleoprotein SmD3a-like [Cucumis melo] | 1.16e-85 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| XP_022151728.1 small nuclear ribonucleoprotein SmD3b-like [Momordica charantia] | 3.74e-82 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSA GRGA PS RR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| XP_038896140.1 small nuclear ribonucleoprotein SmD3a-like [Benincasa hispida] | 1.93e-84 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGA PSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L5W4 Small nuclear ribonucleoprotein Sm D3 | 4.62e-85 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKV FMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| A0A1S3BVV0 Small nuclear ribonucleoprotein Sm D3 | 5.62e-86 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| A0A5D3D8Q1 Small nuclear ribonucleoprotein Sm D3 | 2.40e-85 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| A0A6J1DDX8 Small nuclear ribonucleoprotein Sm D3 | 1.81e-82 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRGSA GRGA PS RR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| A0A6J1IBE9 Small nuclear ribonucleoprotein Sm D3 | 7.38e-82 | 96.97 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGRAVAMRAKAQAAGRG A GRGA PS RR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62318 Small nuclear ribonucleoprotein Sm D3 | 8.9e-34 | 55.74 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSAPGRG
G+A ++A+ A GRG GRG
Subjt: GRAVAMRAKAQAAGRGSAPGRG
|
|
| P62320 Small nuclear ribonucleoprotein Sm D3 | 8.9e-34 | 55.74 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSAPGRG
G+A ++A+ A GRG GRG
Subjt: GRAVAMRAKAQAAGRGSAPGRG
|
|
| P62323 Small nuclear ribonucleoprotein Sm D3 | 8.9e-34 | 55.74 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSAPGRG
G+A ++A+ A GRG GRG
Subjt: GRAVAMRAKAQAAGRGSAPGRG
|
|
| Q9LM92 Small nuclear ribonucleoprotein SmD3b | 8.6e-53 | 84.21 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAK-AQAAGRGSAPGRGAPPSGRR
VGRGR AMR K A GRG+ GRGA P RR
Subjt: VGRGRAVAMRAK-AQAAGRGSAPGRGAPPSGRR
|
|
| Q9S7E6 Small nuclear ribonucleoprotein SmD3a | 2.5e-52 | 82.58 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGR AMRAK GRG+ GRGA P RR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 6.1e-54 | 84.21 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAK-AQAAGRGSAPGRGAPPSGRR
VGRGR AMR K A GRG+ GRGA P RR
Subjt: VGRGRAVAMRAK-AQAAGRGSAPGRGAPPSGRR
|
|
| AT1G76300.1 snRNP core protein SMD3 | 1.8e-53 | 82.58 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
VGRGR AMRAK GRG+ GRGA P RR
Subjt: VGRGRAVAMRAKAQAAGRGSAPGRGAPPSGRR
|
|
| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 1.1e-07 | 28.93 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSAPGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSAPGRG
|
|
| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 1.1e-07 | 28.93 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSAPGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSAPGRG
|
|
| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.4e-10 | 32.77 | Show/hide |
Query: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ ++++ +PD + + ++ R K +G GRGR
Subjt: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
Query: AVAMRAKAQAAGRGSAPGR
V A+ GRG++ G+
Subjt: AVAMRAKAQAAGRGSAPGR
|
|
