CuGenDBv2

Gene ID	Cucsat.G11388
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Plant regulator RWP-RK
Genome location	ctg1798:275722..278674
RNA-Seq Expression	Cucsat.G11388
Synteny	Cucsat.G11388
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064524.1 Plant regulator RWP-RK [Cucumis melo var. makuwa]

3.42e-140

97.16

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Query:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
        MS LQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
Subjt:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA

Query:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
        ATDDRHVA+LGDLTLDQCSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVN
Subjt:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN

Query:  IQSEQIVNVTQ
        IQSEQIVNVTQ
Subjt:  IQSEQIVNVTQ

KGN55363.1 hypothetical protein Csa_012592 [Cucumis sativus]

3.59e-131

100

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Query:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ
        MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ
Subjt:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ

Query:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
        CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
Subjt:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ

XP_011654193.1 uncharacterized protein LOC105435315 [Cucumis sativus]

1.09e-143

100

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Query:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
        MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
Subjt:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA

Query:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
        ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
Subjt:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN

Query:  IQSEQIVNVTQ
        IQSEQIVNVTQ
Subjt:  IQSEQIVNVTQ

XP_016901311.1 PREDICTED: uncharacterized protein LOC103493899 isoform X1 [Cucumis melo]

1.81e-131

96.98

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Query:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD
        +KQEAMEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVA+LGD
Subjt:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD

Query:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
        LTLDQCSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
Subjt:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ

XP_038896661.1 uncharacterized protein LOC120084924 [Benincasa hispida]

3.06e-136

95.26

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Query:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
        MS LQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELF+SAKAKADLSS LG+INQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
Subjt:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA

Query:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
        ATDDRHVAILGDLTLDQCSELQEMSRRISNL+G EFNR+GVKYEWSKKLD +LPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
Subjt:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN

Query:  IQSEQIVNVTQ
        IQ+EQIVNVTQ
Subjt:  IQSEQIVNVTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0T5 Uncharacterized protein

1.74e-131

100

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Query:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ
        MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ
Subjt:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ

Query:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
        CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
Subjt:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ

A0A1S4DZ94 uncharacterized protein LOC103493899 isoform X1

8.79e-132

96.98

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Query:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD
        +KQEAMEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVA+LGD
Subjt:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD

Query:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
        LTLDQCSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
Subjt:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ

A0A1S4DZA7 uncharacterized protein LOC103493899 isoform X2

7.49e-130

96.94

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Query:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD
        +KQEAMEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVA+LGD
Subjt:  VKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD

Query:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVN
        LTLDQCSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVN
Subjt:  LTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVN

A0A1S4DZB9 uncharacterized protein LOC103493899 isoform X3

2.34e-129

97.42

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Query:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ
        MEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVA+LGDLTLDQ
Subjt:  MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQ

Query:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
        CSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ
Subjt:  CSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQ

A0A5A7VBB9 Plant regulator RWP-RK

1.65e-140

97.16

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Query:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
        MS LQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFV AKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA
Subjt:  MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRA

Query:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN
        ATDDRHVA+LGDLTLDQCSELQEMSRRISNLNGGEFNR+GVKYEWSKKLDQNLPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVFVN
Subjt:  ATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVN

Query:  IQSEQIVNVTQ
        IQSEQIVNVTQ
Subjt:  IQSEQIVNVTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G12070.1 unknown protein

2.5e-12

27.32

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Query:  EDWDETMPLPGDVIE--GVAEGDNDELFVS--AKAKADLSSQLGRI--NQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD
        E+W   M   GD++E   +  G    +F +     KA L   L     N++  +V ++V+RG       +  I    S  +R++ +R+  D  +     D
Subjt:  EDWDETMPLPGDVIE--GVAEGDNDELFVS--AKAKADLSSQLGRI--NQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGD

Query:  LTLDQCSELQEM--SRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEH--------SMEATTSRCMAWFCAAVSSGAPLVFVNIQ
         T   C  LQE   SR +  L   +     V Y W +++ + LP   SS   SILF+P    +         +E T +R  AW   + ++G P+VF+NIQ
Subjt:  LTLDQCSELQEM--SRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEH--------SMEATTSRCMAWFCAAVSSGAPLVFVNIQ

Query:  SEQIV
        +E ++
Subjt:  SEQIV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGTTATCTTCAAACAGTCGTTTGTGTTAAAAAAGTGAAGCAAGAAGCCATGGAGGATTGGGACGAGACCATGCCGTTACCTGGAGATGTAATTGAAGGAGTTGCAGA
AGGTGATAACGATGAGTTGTTCGTATCGGCCAAGGCCAAGGCTGATCTTAGTTCGCAGCTGGGCCGGATCAACCAGCAGTTCGAAGTTGTGTGGTTAAAGGTGAAGCGTG
GAGATGCCACGCTTAAGCTTCGAGCACGCATCATTCAAGAGAAGGCATCGATTTTACAACGAAAATTCACCATTCGGGCGGCAACAGATGATCGACATGTAGCGATACTA
GGGGATCTCACCCTAGACCAGTGCTCTGAACTGCAGGAAATGAGTAGAAGAATATCAAACCTGAATGGTGGAGAATTTAACAGAAAAGGTGTGAAGTATGAATGGAGCAA
GAAACTCGATCAGAATCTTCCTGATCATCGTTCGTCAGTCATAAGCTCCATCCTATTCATGCCATTGAAAGGCGAGCACTCCATGGAGGCCACAACTAGCCGATGTATGG
CCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTTTGGTGTTTGTCAATATTCAATCGGAACAGATAGTTAATGTAACTCAAGTAATACACATATCGGTTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAIL
GDLTLDQCSELQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQVIHISV

Cucsat.G11388 (gene) of Cucumber (B10) v3 genome