CuGenDBv2

Gene ID	Cucsat.G11411
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Eukaryotic translation initiation factor 5A
Genome location	ctg1798:731510..734038
RNA-Seq Expression	Cucsat.G11411
Synteny	Cucsat.G11411
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0045901 - positive regulation of translational elongation (biological process) GO:0045905 - positive regulation of translational termination (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0003746 - translation elongation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR001884 - Translation elongation factor IF5A-like IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR019769 - Translation elongation factor, IF5A, hypusine site IPR020189 - Translation elongation factor, IF5A C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145502.1 eukaryotic translation initiation factor 5A [Cucumis sativus]

1.48e-110

100

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

XP_008452854.1 PREDICTED: eukaryotic translation initiation factor 5A-like [Cucumis melo]

7.04e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMS+MGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

XP_012438813.1 PREDICTED: eukaryotic translation initiation factor 5A [Gossypium raimondii]

7.04e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTDDNLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

XP_012470790.1 PREDICTED: eukaryotic translation initiation factor 5A-like [Gossypium raimondii]

7.04e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTD+NLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

XP_038899640.1 eukaryotic translation initiation factor 5A-like [Benincasa hispida]

6.24e-110

99.37

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5K9 Eukaryotic translation initiation factor 5A

7.16e-111

100

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

A0A0D2S6G9 Eukaryotic translation initiation factor 5A

3.41e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTD+NLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

A0A2P5R0D7 Eukaryotic translation initiation factor 5A

3.41e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTD+NLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

A0A5D2AH83 Eukaryotic translation initiation factor 5A

3.41e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTD+NLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

A0A5D2SLQ2 Eukaryotic translation initiation factor 5A

3.41e-109

98.11

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTDSGDTKDDLRLPTD+NLLKQIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

SwissProt top hits

e value

%identity

Alignment

P24922 Eukaryotic translation initiation factor 5A-2

6.2e-82

93.08

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEH FESKADAGASKTYPQQAG IRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLT++G+TKDDLRLPTDDNLL QIK+GFAEGKDLVVSVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

P56337 Eukaryotic translation initiation factor 5A-5

4.0e-81

90.57

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLT++G+TKDDLRLPTDD LL Q+K+GFAEGKDLV+SVMSAMGEEQIC +KDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

P69039 Eukaryotic translation initiation factor 5A-1

1.4e-81

91.19

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLT++G+TKDDLRLPTDDNLL  IK+GFAEGKDLV+SVMSAMGEEQIC +KD+GPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

P69040 Eukaryotic translation initiation factor 5A-1

1.4e-81

91.19

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLT++G+TKDDLRLPTDDNLL  IK+GFAEGKDLV+SVMSAMGEEQIC +KD+GPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

Q9AXJ4 Eukaryotic translation initiation factor 5A

2.8e-82

91.82

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFESKADAGASKT+PQQAG IRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHFVGIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLT++G+TKDDLRLPTD+NLL QIK+GFAEGKDLVVSVMSAMGEE+IC+LKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

Arabidopsis top hits

e value

%identity

Alignment

AT1G13950.1 eukaryotic elongation factor 5A-1

5.1e-79

89.94

Show/hide

Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFES +DAGASKTYPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        +VSLLTD+G TKDDL+LP DD LL+QIK GF +GKDLVVSVMSAMGEEQI ALKDIGPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

AT1G26630.1 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

5.4e-73

82.8

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFTAKKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIG
        FVSLLTDSG TKDDL+LPTDD L  Q++ GF EGKD+VVSVMS+MGEEQICA+K++G
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIG

AT1G26630.2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

3.4e-59

85.04

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFTAKKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQI
        FVSLLTDSG TKDDL+LPTDD L  Q+
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQI

AT1G69410.1 eukaryotic elongation factor 5A-3

2.3e-76

85.53

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Query:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFT+KKLEDIVPSSHNCDVPHVNR DYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK
        FVSLLTD+G TKDDL+LPTD+ LL Q+K GF EGKD+VVSVMSAMGEEQ+CALK++GPK
Subjt:  FVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGGACGAGGAGCATCACTTTGAATCCAAGGCCGACGCCGGAGCCTCCAAGACGTACCCACAACAGGCCGGAGCTATCCGGAAGAACGGCTACATCGTCATCAAGAA
CCGTCCATGCAAGGTGGTTGAGGTTTCAACTTCTAAGACAGGAAAGCACGGCCATGCTAAGTGTCACTTTGTTGGAATTGACATCTTCACTGCCAAGAAGCTTGAAGATA
TTGTTCCTTCATCCCACAATTGTGATGTGCCCCATGTTAATCGTACTGATTATCAGCTCATTGATATCTCTGAGGATGGATTTGTGAGTCTTTTAACTGACAGTGGTGAT
ACCAAGGATGATCTGAGACTTCCAACTGATGATAATCTGCTCAAACAGATTAAGGAAGGATTTGCTGAAGGAAAGGACCTTGTCGTGTCGGTGATGTCTGCCATGGGAGA
GGAACAAATTTGTGCCCTCAAGGATATTGGCCCGAAGTAG

mRNA sequence

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Protein sequence

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MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGD
TKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK

Cucsat.G11411 (gene) of Cucumber (B10) v3 genome