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Cucsat.G11465 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11465
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTy3/gypsy retrotransposon protein
Genome locationctg1798:1487269..1492065
RNA-Seq ExpressionCucsat.G11465
SyntenyCucsat.G11465
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0009116 - nucleoside metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0030036 - actin cytoskeleton organization (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037156.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.01e-6083.93Show/hide
Query:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR
        F+EGLPKS G+EVILVVVDRF KYAHFL LKH FDAK++AELFVKE+VRLHGFPQSIVS+ DKIFLSNFW+ELFRLVGT+ NRST YHPQTDGQTEVVN 
Subjt:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR

Query:  SVEIYLRCFCGE
        S+E YLRCFCGE
Subjt:  SVEIYLRCFCGE

KAA0063378.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]5.29e-5883.93Show/hide
Query:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR
        F+EGLPKS GYEVILVVVD FSKYAHFL LKHPFDAK +A+LF+KEIVR HGFPQSIVS+ DKI LS+FW+ELF L  T+LNRSTTYHPQTDGQTEVVNR
Subjt:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR

Query:  SVEIYLRCFCGE
        SVEIYLRCFCGE
Subjt:  SVEIYLRCFCGE

KAA0066077.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]6.49e-5981.58Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G++VILVVVDRFSKYAHFL LKHPFDA+I+AE+FVKE+VRLHGFP+SIVS+ DK+FLS+FW+ELFRL GT+LNRSTTYHPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        +RSVE YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

TYK04251.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.56e-5881.58Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G+EVI VV+DR SKYAHFL LK+PFDAKI+AELFVKE+VRLHGFP+SIVS+ DKIFLSNFW+ELFRL GT+LNRSTT+HPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        NRS+E YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

TYK17139.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]4.04e-5983.33Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G+EVILVVVDRFSKY HFL LKHPFDAK +AELFVKE+VRLH FPQSIVSN DKIFLS+FW+ELFRL GT+L+RST YHPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        NRSVE YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

TrEMBL top hitse value%identityAlignment
A0A5A7T4U6 Transposon Tf2-1 polyprotein isoform X14.90e-6183.93Show/hide
Query:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR
        F+EGLPKS G+EVILVVVDRF KYAHFL LKH FDAK++AELFVKE+VRLHGFPQSIVS+ DKIFLSNFW+ELFRLVGT+ NRST YHPQTDGQTEVVN 
Subjt:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR

Query:  SVEIYLRCFCGE
        S+E YLRCFCGE
Subjt:  SVEIYLRCFCGE

A0A5A7V717 Retrotransposable element Tf22.56e-5883.93Show/hide
Query:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR
        F+EGLPKS GYEVILVVVD FSKYAHFL LKHPFDAK +A+LF+KEIVR HGFPQSIVS+ DKI LS+FW+ELF L  T+LNRSTTYHPQTDGQTEVVNR
Subjt:  FLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNR

Query:  SVEIYLRCFCGE
        SVEIYLRCFCGE
Subjt:  SVEIYLRCFCGE

A0A5A7VG68 Transposon Tf2-9 polyprotein3.14e-5981.58Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G++VILVVVDRFSKYAHFL LKHPFDA+I+AE+FVKE+VRLHGFP+SIVS+ DK+FLS+FW+ELFRL GT+LNRSTTYHPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        +RSVE YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

A0A5D3BX34 Transposon Ty3-I Gag-Pol polyprotein7.58e-5981.58Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G+EVI VV+DR SKYAHFL LK+PFDAKI+AELFVKE+VRLHGFP+SIVS+ DKIFLSNFW+ELFRL GT+LNRSTT+HPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        NRS+E YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

A0A5D3D379 Putative retroelement pol polyprotein1.96e-5983.33Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+EGLPK+ G+EVILVVVDRFSKY HFL LKHPFDAK +AELFVKE+VRLH FPQSIVSN DKIFLS+FW+ELFRL GT+L+RST YHPQTDGQTEVV
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFCGE
        NRSVE YLRCFCGE
Subjt:  NRSVEIYLRCFCGE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.3e-1739.29Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+  LP+S GY  + VVVDRFSK A  +       A+  A +F + ++   G P+ I+++ D IF S  W++        +  S  Y PQTDGQTE  
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFC
        N++VE  LRC C
Subjt:  NRSVEIYLRCFC

P0CT35 Transposon Tf2-2 polyprotein1.3e-1739.29Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+  LP+S GY  + VVVDRFSK A  +       A+  A +F + ++   G P+ I+++ D IF S  W++        +  S  Y PQTDGQTE  
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFC
        N++VE  LRC C
Subjt:  NRSVEIYLRCFC

P0CT36 Transposon Tf2-3 polyprotein1.3e-1739.29Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+  LP+S GY  + VVVDRFSK A  +       A+  A +F + ++   G P+ I+++ D IF S  W++        +  S  Y PQTDGQTE  
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFC
        N++VE  LRC C
Subjt:  NRSVEIYLRCFC

P0CT41 Transposon Tf2-12 polyprotein1.3e-1739.29Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+  LP+S GY  + VVVDRFSK A  +       A+  A +F + ++   G P+ I+++ D IF S  W++        +  S  Y PQTDGQTE  
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFC
        N++VE  LRC C
Subjt:  NRSVEIYLRCFC

Q9UR07 Transposon Tf2-11 polyprotein1.3e-1739.29Show/hide
Query:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV
        M F+  LP+S GY  + VVVDRFSK A  +       A+  A +F + ++   G P+ I+++ D IF S  W++        +  S  Y PQTDGQTE  
Subjt:  MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVV

Query:  NRSVEIYLRCFC
        N++VE  LRC C
Subjt:  NRSVEIYLRCFC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTGAAGGATTGCCCAAATCCTTGGGATATGAAGTGATATTGGTGGTGGTGGATCGCTTTAGTAAATACGCTCACTTCCTAGGCCTCAAGCATCCTTTTGA
TGCCAAGATTATGGCAGAATTATTTGTGAAGGAGATAGTAAGGTTGCATGGCTTTCCGCAATCAATTGTTTCTAACTGTGATAAGATTTTTCTGAGTAATTTTTGGAGAG
AACTATTTCGTTTGGTAGGCACTGAATTGAACCGGAGCACCACTTATCATCCTCAAACGGATGGTCAAACAGAGGTTGTTAACAGATCAGTGGAGATTTACCTACGTTGC
TTCTGTGGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCTTGAAGGATTGCCCAAATCCTTGGGATATGAAGTGATATTGGTGGTGGTGGATCGCTTTAGTAAATACGCTCACTTCCTAGGCCTCAAGCATCCTTTTGA
TGCCAAGATTATGGCAGAATTATTTGTGAAGGAGATAGTAAGGTTGCATGGCTTTCCGCAATCAATTGTTTCTAACTGTGATAAGATTTTTCTGAGTAATTTTTGGAGAG
AACTATTTCGTTTGGTAGGCACTGAATTGAACCGGAGCACCACTTATCATCCTCAAACGGATGGTCAAACAGAGGTTGTTAACAGATCAGTGGAGATTTACCTACGTTGC
TTCTGTGGGGAGTGA
Protein sequenceShow/hide protein sequence
MKFLEGLPKSLGYEVILVVVDRFSKYAHFLGLKHPFDAKIMAELFVKEIVRLHGFPQSIVSNCDKIFLSNFWRELFRLVGTELNRSTTYHPQTDGQTEVVNRSVEIYLRC
FCGE