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Cucsat.G11589 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11589
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Genome locationctg1820:827889..830490
RNA-Seq ExpressionCucsat.G11589
SyntenyCucsat.G11589
Gene Ontology termsNA
InterPro domainsIPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607085.1 Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia]1.56e-6789.26Show/hide
Query:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE+ LPN D+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]6.22e-78100Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]3.46e-7596.69Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLELLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]7.73e-6890.08Show/hide
Query:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE+ LPN D+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]5.75e-7495.87Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+ PNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KW18 Uncharacterized protein3.01e-78100Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 21.68e-7596.69Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEERLPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLELLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVCQNTP
        MLDKHVSMLESKVLSVCQNTP
Subjt:  MLDKHVSMLESKVLSVCQNTP

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 23.74e-6890.08Show/hide
Query:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE+ LPN D+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 23.74e-6890.08Show/hide
Query:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE+ LPN D+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEER-LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSVCQNT
        SMLDKH+SMLESKVLSVCQN+
Subjt:  SMLDKHVSMLESKVLSVCQNT

W9R9H2 Uncharacterized protein3.78e-5271.79Show/hide
Query:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA+K ++ P+RD+LAESLN+ FTSV  M+KS+L G++NQLELLE+MNLRV EEYKG+GDVASG+RVFVEQLKSKSG FDEY  +IE I+ QVTEFEAVIS
Subjt:  MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSVC
        MLD++VS LESK+ S C
Subjt:  MLDKHVSMLESKVLSVC

SwissProt top hitse value%identityAlignment
F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 29.0e-3366.35Show/hide
Query:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RDDLAESL   FTSVS M+KS+L G++N L+LLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV

Q32WR5 Biogenesis of lysosome-related organelles complex-1 subunit 25.5e-0628.44Show/hide
Query:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q4R7C8 Biogenesis of lysosome-related organelles complex 1 subunit 23.2e-0628.44Show/hide
Query:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 22.0e-1134.86Show/hide
Query:  LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS
        LP  +DL  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y ++I +++  VT+ E  + +LD++  
Subjt:  LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLESKVLSV
         LE KV ++
Subjt:  MLESKVLSV

Q6QNY1 Biogenesis of lysosome-related organelles complex 1 subunit 23.2e-0628.44Show/hide
Query:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S   +LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Arabidopsis top hitse value%identityAlignment
AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.6.4e-3466.35Show/hide
Query:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RDDLAESL   FTSVS M+KS+L G++N L+LLE+MNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAAAGAGGAGCGATTACCGAACAGAGACGACCTCGCCGAGTCGCTTAATGAATTCTTCACCAGCGTGTCGGAAATGATCAAATCGGACCTTCTTGGATCAAG
CAATCAGCTGGAACTTTTAGAGAGAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAA
AGAGTGGTGGGTTTGACGAGTATATAAACCAAATTGAGAAGATAGAGCATCAGGTGACCGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAG
TCTAAAGTGTTGTCTGTTTGTCAAAACACGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAGAAAGAGGAGCGATTACCGAACAGAGACGACCTCGCCGAGTCGCTTAATGAATTCTTCACCAGCGTGTCGGAAATGATCAAATCGGACCTTCTTGGATCAAG
CAATCAGCTGGAACTTTTAGAGAGAATGAACTTGAGGGTGGCTGAAGAGTACAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAGTTGAAGTCAA
AGAGTGGTGGGTTTGACGAGTATATAAACCAAATTGAGAAGATAGAGCATCAGGTGACCGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAG
TCTAAAGTGTTGTCTGTTTGTCAAAACACGCCTTAA
Protein sequenceShow/hide protein sequence
MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLE
SKVLSVCQNTP