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Cucsat.G1160 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1160
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionglycine-rich cell wall structural protein
Genome locationctg1:8826792..8827574
RNA-Seq ExpressionCucsat.G1160
SyntenyCucsat.G1160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049179.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]1.14e-7393.42Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFV+FLLVA+AAARGVPGGDQAEFVEAVEVKAAELPRNAGRGD VRDEKNFIYGGVGGFAGMGGYAGLGG PMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGG    G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+GTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

KAE8650313.1 hypothetical protein Csa_010764 [Cucumis sativus]3.41e-79100Show/hide
Query:  MFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGG
        MFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGG
Subjt:  MFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGG

Query:  GGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        GGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
Subjt:  GGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

XP_008439361.1 PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]4.65e-7392.76Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFV+FLLVA+AAARGVPGGDQAEFVEAVEVKA ELPRNAGRGD VRDEKNFIYGGVGGFAGMGGYAGLGG PMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGG    G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+GTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

XP_011652752.1 glycine-rich protein 23 [Cucumis sativus]4.37e-81100Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

XP_038876527.1 glycine-rich protein 23-like [Benincasa hispida]1.69e-5281.06Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFVM LLVAVA AR VP GD+ EFV+AVEVKA E+P++ GRGDAV D+KNF+YGG+GGFAGMGGYAGLGGLPMLGG+AGIGKFGGIGGVAGIG LG P G
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGG-ASGIGGLAGHGLGGAGGIG
        LGGGG   GVGG A GIGGLAGHGLGGAGGIG
Subjt:  LGGGGAGPGVGG-ASGIGGLAGHGLGGAGGIG

TrEMBL top hitse value%identityAlignment
A0A0A0L460 Uncharacterized protein3.43e-7193.42Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVG          LGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

A0A1S3AYL0 uncharacterized PE-PGRS family protein PE_PGRS462.25e-7392.76Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFV+FLLVA+AAARGVPGGDQAEFVEAVEVKA ELPRNAGRGD VRDEKNFIYGGVGGFAGMGGYAGLGG PMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGG    G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+GTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS465.54e-7493.42Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFV+FLLVA+AAARGVPGGDQAEFVEAVEVKAAELPRNAGRGD VRDEKNFIYGGVGGFAGMGGYAGLGG PMLGGSAGIGKFGGIGGVAGIGSLGDPGG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        LGGG    G GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGG+GTGSGIGG
Subjt:  LGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X21.29e-4272.3Show/hide
Query:  LFVMFLLVAVAAA---RGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGD
        LFVM  L  VAAA   R VPG ++ +FV+AV+VKAAEL   A  GDA RDEK FIYGGVGGFAGMGGYAGLG +PMLGGSAGIGKFGGIGG AGIG  G 
Subjt:  LFVMFLLVAVAAA---RGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGD

Query:  PGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG
         GG+GGGG G    G  GIGGLAGHGLGGAGGIGG+ GHGLGG GG+G
Subjt:  PGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG

A0A6J1IHK9 glycine-rich cell wall structural protein7.85e-4975.32Show/hide
Query:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG
        LFVM  L  VAAAR VPG +Q +FV+AVEVKAAELP  AG G AVRDEKNFIYGGVGGFAGMGGYAGLG +PMLGGSAGIGKFGGIGG AGIG  G  GG
Subjt:  LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGG

Query:  LGGGG---------AGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG
        +GGGG         AG G+GGA GIGGLAGHGLGGAGGIGG+AGHG+GG GG+G
Subjt:  LGGGG---------AGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVG

SwissProt top hitse value%identityAlignment
O48848 Glycine-rich protein 237.7e-0555Show/hide
Query:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGG--AGGVGTGSGIGG
        G+GG  G+GG  GLGG   LGG  G+G  GG+GG  G+G     GG GG G G G+GG  G+GG  G GLGG GG+GG AG G GG   GG+G G GIGG
Subjt:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGG--AGGVGTGSGIGG

Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein6.6e-1249.09Show/hide
Query:  LFVMFLLVAV----AAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVR----DEKNFIYG--GVGGFAGMGGYAGLGGL--PMLGGSAGIGKFGGIGG
        L V+ +L+A+    A AR VP G+  E           +P +A   D +      +K  I G  GVGGFAG+GG AG+GGL  P++GG  GIGK+GGIGG
Subjt:  LFVMFLLVAV----AAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVR----DEKNFIYG--GVGGFAGMGGYAGLGGL--PMLGGSAGIGKFGGIGG

Query:  VAGIGSLGDPGGLGG-GGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
         AGIG     GG+GG GG G GVGG  G+GG    G+GG GG+GGL G GLGG GGVG G G  G
Subjt:  VAGIGSLGDPGGLGG-GGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

AT2G32690.1 glycine-rich protein 235.5e-0655Show/hide
Query:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGG--AGGVGTGSGIGG
        G+GG  G+GG  GLGG   LGG  G+G  GG+GG  G+G     GG GG G G G+GG  G+GG  G GLGG GG+GG AG G GG   GG+G G GIGG
Subjt:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGG--AGGVGTGSGIGG

AT2G32690.2 glycine-rich protein 232.1e-0554.55Show/hide
Query:  GGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        GG+GG  G+GG  GLGG   LGG +G+G  GG+GG +G+G  G  GG  GGGAG G GG +G G   G G+GG GG GG  G G GG  G G G GIGG
Subjt:  GGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

AT2G32690.3 glycine-rich protein 231.7e-0756.12Show/hide
Query:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG
        G+GG  G+GG  GLGG   LGG  G+G  GG+GG  G+G     GG GG G G G+GG  G+GG  G GLGG GG GG AG GLGG GG+G G G GG
Subjt:  GVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGVGGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG

AT4G29020.1 glycine-rich protein4.6e-0550Show/hide
Query:  EAVEVKAAELPRNAGRGDAVRDEKNFI-YGGVGGFAGMGGY----AGLGGLP-MLGGSAGI----GKFGGIGGV-AGIGSLGDPGGLGGG-GAGPGVGGA
        +AV        +N G G  + D+KNF+ + GVGG AG+GG     AGLGG+   +GG AG+    G  GGIGG+  G+G LG  GGLGGG G G GVGG 
Subjt:  EAVEVKAAELPRNAGRGDAVRDEKNFI-YGGVGGFAGMGGY----AGLGGLP-MLGGSAGI----GKFGGIGGV-AGIGSLGDPGGLGGG-GAGPGVGGA

Query:  SGIGGLAGHGLGGAGGIGGLAG-HGLGGAGGVGTGSGIGG
         G  G+ G G+GG GG GGL G  G+GG GG+G GS  GG
Subjt:  SGIGGLAGHGLGGAGGIGGLAG-HGLGGAGGVGTGSGIGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTTTGTAATGTTTTTGCTGGTGGCTGTTGCGGCGGCGCGTGGCGTTCCTGGTGGTGATCAAGCGGAGTTCGTGGAGGCTGTTGAAGTGAAGGCCGCGGAGCTGCCGAG
GAATGCTGGGCGTGGGGATGCTGTTCGTGATGAGAAGAATTTTATCTACGGTGGAGTTGGTGGCTTTGCTGGAATGGGCGGATACGCAGGGTTGGGAGGCTTGCCGATGC
TAGGGGGTTCAGCCGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGACCCCGGCGGTCTGGGAGGTGGAGGAGCTGGTCCCGGCGTC
GGAGGAGCTAGCGGGATTGGCGGTTTAGCCGGGCATGGACTTGGCGGAGCAGGCGGAATTGGTGGTCTAGCTGGGCATGGACTTGGTGGGGCTGGGGGCGTCGGAACCGG
CAGTGGCATCGGAGGC
mRNA sequenceShow/hide mRNA sequence
CTCTTTGTAATGTTTTTGCTGGTGGCTGTTGCGGCGGCGCGTGGCGTTCCTGGTGGTGATCAAGCGGAGTTCGTGGAGGCTGTTGAAGTGAAGGCCGCGGAGCTGCCGAG
GAATGCTGGGCGTGGGGATGCTGTTCGTGATGAGAAGAATTTTATCTACGGTGGAGTTGGTGGCTTTGCTGGAATGGGCGGATACGCAGGGTTGGGAGGCTTGCCGATGC
TAGGGGGTTCAGCCGGGATCGGAAAATTTGGTGGAATTGGTGGGGTCGCTGGAATTGGTAGCTTGGGTGACCCCGGCGGTCTGGGAGGTGGAGGAGCTGGTCCCGGCGTC
GGAGGAGCTAGCGGGATTGGCGGTTTAGCCGGGCATGGACTTGGCGGAGCAGGCGGAATTGGTGGTCTAGCTGGGCATGGACTTGGTGGGGCTGGGGGCGTCGGAACCGG
CAGTGGCATCGGAGGC
Protein sequenceShow/hide protein sequence
LFVMFLLVAVAAARGVPGGDQAEFVEAVEVKAAELPRNAGRGDAVRDEKNFIYGGVGGFAGMGGYAGLGGLPMLGGSAGIGKFGGIGGVAGIGSLGDPGGLGGGGAGPGV
GGASGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGTGSGIGG