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Cucsat.G11811 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11811
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNAD(P)H-quinone oxidoreductase subunit S, chloroplastic
Genome locationctg1820:4115619..4118046
RNA-Seq ExpressionCucsat.G11811
SyntenyCucsat.G11811
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
InterPro domainsIPR021659 - NADH dehydrogenase-like complex, subunit S


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148998.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis sativus]4.57e-94100Show/hide
Query:  MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL
        MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL
Subjt:  MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL

Query:  PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
        PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
Subjt:  PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK

XP_008451952.1 PREDICTED: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucumis melo]2.11e-8794.2Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLGGRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPV
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
        DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK

XP_022982522.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita maxima]3.17e-6275.74Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R AS + H FRPSAAFDLAQLLGGRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL V
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        D VPEDGF+KELMGLTGGFPGGEKGL+KFI+ENPPP
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

XP_023553886.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Cucurbita pepo subsp. pepo]7.86e-6376.47Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQ+PLLKS+FL Q  RR  LHR FPLP R AS + H FRPSA+FDLAQLLGGRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL V
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        D VPEDGF+KELMGLTGGFPGGEKGL+KFISENPPP
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

XP_038902579.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Benincasa hispida]2.55e-7487.5Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLP+PQTPLLKS+FL QNRRR LLHRPFPLP R AS T HAFRPSAAFDLAQLLGGRGLCNGE+GLKEELKRNV+DNPV ADG EIP TS+KL V
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        D VPEDGFEKELMGLTGGFPGGEKGL+KFISENPPP
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

TrEMBL top hitse value%identityAlignment
A0A0A0KV29 Uncharacterized protein1.93e-94100Show/hide
Query:  MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL
        MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL
Subjt:  MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKL

Query:  PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
        PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
Subjt:  PVDSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK

A0A1S3BSR5 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic1.02e-8794.2Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLGGRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPV
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
        DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK

A0A5D3CYY1 NAD(P)H-quinone oxidoreductase subunit S1.02e-8794.2Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASST HAFRPSAAFDLAQLLGGRGLCNGE+G++EELKRNVDDNPV+ADG+EIP TS KLPV
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
        DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPPRK

A0A6J1FWM0 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic4.08e-6074.26Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R A  + H  RPSAAFDLAQLLGGRGLCNGE+GL EELKRNV +  +   G+EIP T++KL V
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        D VPEDGF+KELMGLTGGFPGGEKGL+KFISENPPP
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

A0A6J1IWU0 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic1.54e-6275.74Show/hide
Query:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV
        MASSISLPSPQ+PLLKS+FL +  RR  LHR FPLP R AS + H FRPSAAFDLAQLLGGRGLCNGE+GLKEELKRNV +  +   G+EIP T++KL V
Subjt:  MASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPV

Query:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        D VPEDGF+KELMGLTGGFPGGEKGL+KFI+ENPPP
Subjt:  DSVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

SwissProt top hitse value%identityAlignment
Q9T0A4 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic3.2e-2647.83Show/hide
Query:  SSISLPSPQTPLLKSSFLPQNRRRLLLHRP-FPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVL--ADGSEIPGTSDKLP
        SSI++P+ +TP+ +S FL Q  +   ++R  FP P +   S  +  +    F+L +++GGRGLCNGE+G+++EL+RN++D      A+ +E    SD   
Subjt:  SSISLPSPQTPLLKSSFLPQNRRRLLLHRP-FPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVL--ADGSEIPGTSDKLP

Query:  VD-SVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        +   VPEDGFEKE+MGLTGGFPGGEKGLK FI +NPPP
Subjt:  VD-SVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP

Arabidopsis top hitse value%identityAlignment
AT4G23890.1 unknown protein2.2e-2747.83Show/hide
Query:  SSISLPSPQTPLLKSSFLPQNRRRLLLHRP-FPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVL--ADGSEIPGTSDKLP
        SSI++P+ +TP+ +S FL Q  +   ++R  FP P +   S  +  +    F+L +++GGRGLCNGE+G+++EL+RN++D      A+ +E    SD   
Subjt:  SSISLPSPQTPLLKSSFLPQNRRRLLLHRP-FPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVL--ADGSEIPGTSDKLP

Query:  VD-SVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP
        +   VPEDGFEKE+MGLTGGFPGGEKGLK FI +NPPP
Subjt:  VD-SVPEDGFEKELMGLTGGFPGGEKGLKKFISENPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGCTTCCTCAATCTCCCTTCCATCTCCTCAAACTCCGCTTCTTAAATCCTCCTTTCTCCCACAAAACCGCCGCCGCCTCCTTCTCCACCGACCATTTCCCCT
GCCCGGCCGTCACGCCTCATCAACCCAACACGCTTTCCGGCCCTCCGCCGCCTTCGATTTAGCCCAGCTTCTCGGCGGAAGAGGCCTCTGCAATGGCGAGCAAGGTCTAA
AAGAGGAACTCAAGAGAAACGTCGACGACAATCCAGTCCTCGCAGATGGAAGCGAAATTCCAGGAACCTCCGATAAATTACCGGTTGATAGTGTTCCAGAAGATGGGTTC
GAGAAGGAATTAATGGGCTTAACCGGTGGGTTTCCCGGCGGAGAGAAAGGATTAAAAAAATTCATATCGGAGAATCCTCCTCCTCGGAAAACCCTCCGCTTCAAAATCCG
GCGAAATCGGCTCGATTATAAATACACAGAAACCAAAGCCGCCGGATCTTCCACTGTTGCTACCGGGAATGATTGCGATTGTGAAGAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGCTTCCTCAATCTCCCTTCCATCTCCTCAAACTCCGCTTCTTAAATCCTCCTTTCTCCCACAAAACCGCCGCCGCCTCCTTCTCCACCGACCATTTCCCCT
GCCCGGCCGTCACGCCTCATCAACCCAACACGCTTTCCGGCCCTCCGCCGCCTTCGATTTAGCCCAGCTTCTCGGCGGAAGAGGCCTCTGCAATGGCGAGCAAGGTCTAA
AAGAGGAACTCAAGAGAAACGTCGACGACAATCCAGTCCTCGCAGATGGAAGCGAAATTCCAGGAACCTCCGATAAATTACCGGTTGATAGTGTTCCAGAAGATGGGTTC
GAGAAGGAATTAATGGGCTTAACCGGTGGGTTTCCCGGCGGAGAGAAAGGATTAAAAAAATTCATATCGGAGAATCCTCCTCCTCGGAAAACCCTCCGCTTCAAAATCCG
GCGAAATCGGCTCGATTATAAATACACAGAAACCAAAGCCGCCGGATCTTCCACTGTTGCTACCGGGAATGATTGCGATTGTGAAGAATCCTAA
Protein sequenceShow/hide protein sequence
MSMASSISLPSPQTPLLKSSFLPQNRRRLLLHRPFPLPGRHASSTQHAFRPSAAFDLAQLLGGRGLCNGEQGLKEELKRNVDDNPVLADGSEIPGTSDKLPVDSVPEDGF
EKELMGLTGGFPGGEKGLKKFISENPPPRKTLRFKIRRNRLDYKYTETKAAGSSTVATGNDCDCEES