; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G11888 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11888
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUbiquitin
Genome locationctg1820:2574163..2582559
RNA-Seq ExpressionCucsat.G11888
SyntenyCucsat.G11888
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0019941 - modification-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2986391.1 ubiquitin-60S ribosomal L40 [Olea europaea subsp. europaea]1.42e-6192.38Show/hide
Query:  FGFLQFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRP
        FGF+   +   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRP
Subjt:  FGFLQFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRP

Query:  KKKIK
        KKKIK
Subjt:  KKKIK

KAF0913446.1 hypothetical protein E2562_022226 [Oryza meyeriana var. granulata]3.61e-6295.05Show/hide
Query:  QFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI
        QF +  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI
Subjt:  QFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI

Query:  K
        K
Subjt:  K

OAE34433.1 hypothetical protein AXG93_4875s1530 [Marchantia polymorpha subsp. ruderalis]3.52e-6198.96Show/hide
Query:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        V GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

OVA10021.1 Ubiquitin domain [Macleaya cordata]8.27e-6298.96Show/hide
Query:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        +SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

TYH41770.1 hypothetical protein ES332_D11G016300v1 [Gossypium tomentosum]8.30e-62100Show/hide
Query:  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

TrEMBL top hitse value%identityAlignment
A0A176WPD4 Ubiquitin1.70e-6198.96Show/hide
Query:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        V GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A200QHX2 Ubiquitin4.01e-6298.96Show/hide
Query:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        +SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  VSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A2P2ME52 Ubiquitin2.90e-61100Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A5D2IHY9 Ubiquitin4.02e-62100Show/hide
Query:  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

A0A6G1DLY0 Ubiquitin1.75e-6295.05Show/hide
Query:  QFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI
        QF +  SGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI
Subjt:  QFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
B9DHA6 Ubiquitin-60S ribosomal protein L40-13.6e-4898.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

P0CH34 Ubiquitin-60S ribosomal protein L40-13.6e-4898.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

P0CH35 Ubiquitin-60S ribosomal protein L40-23.6e-4898.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

P49636 Ubiquitin-60S ribosomal protein L402.1e-4898.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCR+KKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

Q42202 Ubiquitin-60S ribosomal protein L40-23.6e-4898.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

Arabidopsis top hitse value%identityAlignment
AT1G55060.1 ubiquitin 121.8e-1897.67Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI

AT1G65350.1 ubiquitin 131.8e-1897.67Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI

AT2G36170.1 Ubiquitin supergroup;Ribosomal protein L40e2.6e-4998.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

AT3G52590.1 ubiquitin extension protein 12.6e-4998.94Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

AT4G05320.2 polyubiquitin 101.8e-1897.67Show/hide
Query:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI
        GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG+
Subjt:  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCTAAGATCCAGGATAAGGAAGGTTGGATTTCTGGTTTCTGAAGCAATATTTCTCTCTTATTCTTTTGGATTTTTACAATTTAGGGTGCATGTTTCAGGTAT
TCCCCCTGACCAGCAGAGACTTATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGAACGCTAGCTGACTACAATATCCAGAAAGAGTCAACACTACACTTGGTGCTCAGGC
TTCGTGGTGGTATTATTGAGCCGTCTTTGATGGCATTGGCTAGGAAGTACAATCAGGACAAGATGATCTGCCGCAAGTGCTATGCCCGCCTGCACCCTCGTGCTGTCAAC
TGCAGGAAAAAGAAGTGTGGACACAGCAACCAGTTGAGGCCAAAGAAGAAAATCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCTAAGATCCAGGATAAGGAAGGTTGGATTTCTGGTTTCTGAAGCAATATTTCTCTCTTATTCTTTTGGATTTTTACAATTTAGGGTGCATGTTTCAGGTAT
TCCCCCTGACCAGCAGAGACTTATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGAACGCTAGCTGACTACAATATCCAGAAAGAGTCAACACTACACTTGGTGCTCAGGC
TTCGTGGTGGTATTATTGAGCCGTCTTTGATGGCATTGGCTAGGAAGTACAATCAGGACAAGATGATCTGCCGCAAGTGCTATGCCCGCCTGCACCCTCGTGCTGTCAAC
TGCAGGAAAAAGAAGTGTGGACACAGCAACCAGTTGAGGCCAAAGAAGAAAATCAAGTAG
Protein sequenceShow/hide protein sequence
MSKLRSRIRKVGFLVSEAIFLSYSFGFLQFRVHVSGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVN
CRKKKCGHSNQLRPKKKIK