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Cucsat.G11896 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G11896
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionmultiple organellar RNA editing factor 8, chloroplastic/mitochondrial
Genome locationctg1820:2726473..2728037
RNA-Seq ExpressionCucsat.G11896
SyntenyCucsat.G11896
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0016554 - cytidine to uridine editing (biological process)
GO:0080156 - mitochondrial mRNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR039206 - MORF/ORRM1/DAG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059032.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa]2.39e-2088Show/hide
Query:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        HSAAPSVR+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

MBA0675999.1 hypothetical protein [Gossypium aridum]5.17e-2056.32Show/hide
Query:  FSLHRSPPSPSLLTPLPPFSAASLPSLLYSPLIS--RHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        FS   +  + +L+TP PP S + L  L   P  S  R S +P+V++FSTR+  SS+ DPNPN+SNRP  ETILLDGCDFEHWLVVME
Subjt:  FSLHRSPPSPSLLTPLPPFSAASLPSLLYSPLIS--RHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

XP_008451724.1 PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis melo]2.39e-2088Show/hide
Query:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        HSAAPSVR+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

XP_018731036.2 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Eucalyptus grandis]1.90e-1961.9Show/hide
Query:  SLHRSPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        S  RSP S  L   L P S+AS          +  +AAPS R+F TRSTSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  SLHRSPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

XP_031740169.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis sativus]4.71e-2063.75Show/hide
Query:  SPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        SP S SL+  L P +A      + +     HSAAPS+R+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  SPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

TrEMBL top hitse value%identityAlignment
A0A0A0KXM3 Uncharacterized protein2.31e-2063.75Show/hide
Query:  SPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        SP S SL+  L P +A      + +     HSAAPS+R+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  SPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

A0A1S3BTA4 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial1.16e-2088Show/hide
Query:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        HSAAPSVR+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

A0A5A7UT11 Multiple organellar RNA editing factor 81.16e-2088Show/hide
Query:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        HSAAPSVR+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

A0A5D3CZ72 Multiple organellar RNA editing factor 81.16e-2088Show/hide
Query:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        HSAAPSVR+FSTR+TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVVME
Subjt:  HSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

A0A7J8WN37 Uncharacterized protein (Fragment)2.50e-2056.32Show/hide
Query:  FSLHRSPPSPSLLTPLPPFSAASLPSLLYSPLIS--RHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        FS   +  + +L+TP PP S + L  L   P  S  R S +P+V++FSTR+  SS+ DPNPN+SNRP  ETILLDGCDFEHWLVVME
Subjt:  FSLHRSPPSPSLLTPLPPFSAASLPSLLYSPLIS--RHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

SwissProt top hitse value%identityAlignment
Q38732 DAG protein, chloroplastic6.8e-0440.54Show/hide
Query:  LLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        LL+ L   S + LP     P+ SR +A P+VR  +    SS   + N N       ETI+L GCD+ HWL+VME
Subjt:  LLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

Q84JZ6 Multiple organellar RNA editing factor 3, mitochondrial3.7e-1052Show/hide
Query:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        F   S  S    PLI     SR S  P   S R  ++ S  S + DP+PNWSNRP  ETILLDGCD+EHWL+VME
Subjt:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

Q9LKA5 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial9.5e-1456.41Show/hide
Query:  PSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        P+ SLL+   P  AA   S+    L+       SV+  ST++TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVV+E
Subjt:  PSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

Arabidopsis top hitse value%identityAlignment
AT3G06790.1 plastid developmental protein DAG, putative2.6e-1152Show/hide
Query:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        F   S  S    PLI     SR S  P   S R  ++ S  S + DP+PNWSNRP  ETILLDGCD+EHWL+VME
Subjt:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

AT3G06790.2 plastid developmental protein DAG, putative2.6e-1152Show/hide
Query:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        F   S  S    PLI     SR S  P   S R  ++ S  S + DP+PNWSNRP  ETILLDGCD+EHWL+VME
Subjt:  FSAASLPSLLYSPLI-----SRHSAAP---SVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME

AT3G15000.1 cobalt ion binding6.7e-1556.41Show/hide
Query:  PSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
        P+ SLL+   P  AA   S+    L+       SV+  ST++TSSS+ DPNPNWSNRP  ETILLDGCDFEHWLVV+E
Subjt:  PSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTCATTTTTTGTCTTTTTTGTTTCAACCTTCTCCCATGGCGACTCAGCTCTTCTCTTTGTTTTCACGTTCCTTTCTCACTCCACCGGAGTCCCCCATCTCCGTCTCT
TCTCACTCCTCTTCCTCCCTTCTCCGCCGCCTCCCTCCCCTCGCTGCTATACTCACCGCTGATTTCCCGTCACTCTGCTGCACCGAGCGTGAGGAACTTCTCTACCCGTT
CCACTTCTTCGTCTATCAAAGATCCCAATCCTAACTGGTCTAATCGACCACTCATGGAGACCATATTGCTTGATGGCTGTGATTTTGAACACTGGCTCGTTGTCATGGAG
AACAACTCACGAGGGATGAGATTATCGACAGCTATATAA
mRNA sequenceShow/hide mRNA sequence
TTTTTCATTTTTTGTCTTTTTTGTTTCAACCTTCTCCCATGGCGACTCAGCTCTTCTCTTTGTTTTCACGTTCCTTTCTCACTCCACCGGAGTCCCCCATCTCCGTCTCT
TCTCACTCCTCTTCCTCCCTTCTCCGCCGCCTCCCTCCCCTCGCTGCTATACTCACCGCTGATTTCCCGTCACTCTGCTGCACCGAGCGTGAGGAACTTCTCTACCCGTT
CCACTTCTTCGTCTATCAAAGATCCCAATCCTAACTGGTCTAATCGACCACTCATGGAGACCATATTGCTTGATGGCTGTGATTTTGAACACTGGCTCGTTGTCATGGAG
AACAACTCACGAGGGATGAGATTATCGACAGCTATATAA
Protein sequenceShow/hide protein sequence
FFIFCLFCFNLLPWRLSSSLCFHVPFSLHRSPPSPSLLTPLPPFSAASLPSLLYSPLISRHSAAPSVRNFSTRSTSSSIKDPNPNWSNRPLMETILLDGCDFEHWLVVME
NNSRGMRLSTAI