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Cucsat.G1192 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1192
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionHR-like lesion-inducing protein-related
Genome locationctg1:9367812..9368719
RNA-Seq ExpressionCucsat.G1192
SyntenyCucsat.G1192
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0016020 - membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049272.1 uncharacterized protein E6C27_scaffold171G005120 [Cucumis melo var. makuwa]1.89e-5771.97Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                    RH+V LSLSLKGIG LLFV GSRVGAYLLLL+L IITP
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        VLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

TYK17285.1 uncharacterized protein E5676_scaffold434G001390 [Cucumis melo var. makuwa]5.94e-5770.62Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                       RH+V LSLSLKGIG LLFV GSRVGAYLLLL+L I
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI

Query:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        ITPVLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

XP_008438550.1 PREDICTED: uncharacterized protein LOC103483616 isoform X1 [Cucumis melo]1.46e-5771.25Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                       RH+V LSLSLKGIG LLFV GSRVGAYLLLL+LAI
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI

Query:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        ITPVLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

XP_008438551.1 PREDICTED: uncharacterized protein LOC103483616 isoform X2 [Cucumis melo]4.64e-5872.61Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                    RH+V LSLSLKGIG LLFV GSRVGAYLLLL+LAIITP
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        VLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

XP_031737827.1 uncharacterized protein LOC101212763 isoform X1 [Cucumis sativus]6.33e-86100Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL
        MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL

Query:  EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH
        EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH
Subjt:  EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH

TrEMBL top hitse value%identityAlignment
A0A0A0L767 Uncharacterized protein3.07e-86100Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL
        MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFL

Query:  EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH
        EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH
Subjt:  EHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH

A0A1S3AXB3 uncharacterized protein LOC103483616 isoform X22.25e-5872.61Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                    RH+V LSLSLKGIG LLFV GSRVGAYLLLL+LAIITP
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        VLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

A0A1S3AXB4 uncharacterized protein LOC103483616 isoform X17.08e-5871.25Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                       RH+V LSLSLKGIG LLFV GSRVGAYLLLL+LAI
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI

Query:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        ITPVLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

A0A5A7U0G2 Uncharacterized protein9.13e-5871.97Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                    RH+V LSLSLKGIG LLFV GSRVGAYLLLL+L IITP
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV--------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        VLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

A0A5D3D0P1 Uncharacterized protein2.88e-5770.62Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI
        MGFFS  GRLLFASFFILSA QMFN   NNGGPAA ELSSKV                       RH+V LSLSLKGIG LLFV GSRVGAYLLLL+L I
Subjt:  MGFFSALGRLLFASFFILSACQMFN---NNGGPAAVELSSKV-----------------------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAI

Query:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA
        ITPVLFDFFN SL KP FGI LSDFL+HIALFGALLFF+GMK T SPKK  KKKTQK KA
Subjt:  ITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGT-SPKKHSKKKTQKQKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related3.5e-2849.37Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSK--------------------VRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        MGFFS LGR+LFAS FILSA QMFN+   +GGPAA EL+ K                    V+ VV   ++LKG+G LLFV+G+  GAYLL +YL +++P
Subjt:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSK--------------------VRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKG--TSPKKHSKKKTQKQKA
        +L+DF+N       F ++L++FL+ +AL GALLFFIGMK   TS K+  KK+T K KA
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKG--TSPKKHSKKKTQKQKA

AT3G23180.1 HR-like lesion-inducing protein-related3.8e-0635.35Show/hide
Query:  LGRLLFASFFILSACQMF-----NNNG-----GPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIM
        +GR LFAS F LS+   +     N NG      P       +++H++ +S+ ++ +G L+F+ GS  GA+LLL+Y  I T V  DF+N  L    FG++
Subjt:  LGRLLFASFFILSACQMF-----NNNG-----GPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIM

AT3G23190.1 HR-like lesion-inducing protein-related3.1e-0834.55Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKV-------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFG
        M +    GR++FAS F++SA + +    G AA EL  K+       + +V L + +K +G +LF+  + VGA LLL+Y AI++P+L+DF+N    +  F 
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKV-------RHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFG

Query:  IMLSDFLEHI
        +  + F E +
Subjt:  IMLSDFLEHI

AT4G14420.1 HR-like lesion-inducing protein-related2.1e-2044.1Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSK----VRHV----------------VGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP
        M   S LGR LF S F+LSA Q FN+   +GG +A  L  K    V HV                V  +++LKGIG LLFV GS +GAYLLLL+ A+ TP
Subjt:  MGFFSALGRLLFASFFILSACQMFNN---NGGPAAVELSSK----VRHV----------------VGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITP

Query:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH
        +L+DF+N  + +  FG + S F + +AL G LLFFIGMK +  +KH  ++ +K+  KAKA+
Subjt:  VLFDFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGTSPKKHSKKKTQKQKAKAKAH

AT5G43460.1 HR-like lesion-inducing protein-related3.8e-3051.95Show/hide
Query:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSK--------------------VRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLF
        MGFFS LGR+LFAS FILSA QMF N+GGPAA EL+ K                    VR VV   ++LKG+G LLFV+G+  GAYLL  YL +  P+L+
Subjt:  MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSK--------------------VRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLF

Query:  DFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGTSP-KKHSKKKTQKQKA
        DF+N    +  F ++L++FL+ +ALFGALLFFIGMK ++P KK+ KK+T K KA
Subjt:  DFFNLSLLKPTFGIMLSDFLEHIALFGALLFFIGMKGTSP-KKHSKKKTQKQKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTTCTCCGCCCTTGGACGCCTCCTCTTTGCCTCCTTCTTCATCCTCTCTGCTTGTCAGATGTTTAACAATAATGGTGGGCCAGCAGCTGTGGAATTGTCTTC
AAAGGTCAGACATGTGGTTGGTCTTTCATTATCTCTCAAAGGGATTGGAGCTCTTCTATTTGTTTTGGGCTCAAGAGTTGGAGCTTATCTTTTGCTTCTTTACTTGGCTA
TTATCACTCCGGTTCTTTTCGATTTCTTCAACCTTAGTCTACTGAAACCTACTTTTGGTATCATGTTAAGTGATTTCTTAGAGCACATTGCACTTTTTGGTGCTCTCCTT
TTCTTCATAGGGATGAAGGGCACAAGTCCAAAGAAGCACTCAAAAAAGAAGACCCAAAAACAAAAAGCAAAAGCAAAAGCACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCTTCTCCGCCCTTGGACGCCTCCTCTTTGCCTCCTTCTTCATCCTCTCTGCTTGTCAGATGTTTAACAATAATGGTGGGCCAGCAGCTGTGGAATTGTCTTC
AAAGGTCAGACATGTGGTTGGTCTTTCATTATCTCTCAAAGGGATTGGAGCTCTTCTATTTGTTTTGGGCTCAAGAGTTGGAGCTTATCTTTTGCTTCTTTACTTGGCTA
TTATCACTCCGGTTCTTTTCGATTTCTTCAACCTTAGTCTACTGAAACCTACTTTTGGTATCATGTTAAGTGATTTCTTAGAGCACATTGCACTTTTTGGTGCTCTCCTT
TTCTTCATAGGGATGAAGGGCACAAGTCCAAAGAAGCACTCAAAAAAGAAGACCCAAAAACAAAAAGCAAAAGCAAAAGCACATTAG
Protein sequenceShow/hide protein sequence
MGFFSALGRLLFASFFILSACQMFNNNGGPAAVELSSKVRHVVGLSLSLKGIGALLFVLGSRVGAYLLLLYLAIITPVLFDFFNLSLLKPTFGIMLSDFLEHIALFGALL
FFIGMKGTSPKKHSKKKTQKQKAKAKAH